STRINGSTRING
SNOG_04244 SNOG_04244 SNOG_02186 SNOG_02186 SNOG_08506 SNOG_08506 SNOG_09554 SNOG_09554
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
SNOG_04244Uncharacterized protein. (1125 aa)
SNOG_02186Uncharacterized protein. (1220 aa)
SNOG_08506Uncharacterized protein. (1840 aa)
SNOG_09554Uncharacterized protein. (733 aa)
Your Current Organism:
Parastagonospora nodorum
NCBI taxonomy Id: 321614
Other names: P. nodorum SN15, Parastagonospora nodorum SN15, Phaeosphaeria nodorum SN15
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