Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| SDL15220.1 | SDL56085.1 | SAMN04488692_1027 | SAMN04488692_105164 | Hypothetical protein. | DnaB-like helicase C terminal domain-containing protein. | 0.683 |
| SDL15220.1 | SDM04630.1 | SAMN04488692_1027 | SAMN04488692_1159 | Hypothetical protein. | Primary replicative DNA helicase. | 0.683 |
| SDL15220.1 | SDM19702.1 | SAMN04488692_1027 | SAMN04488692_1214 | Hypothetical protein. | Replicative DNA helicase. | 0.683 |
| SDL15220.1 | polA | SAMN04488692_1027 | SAMN04488692_11223 | Hypothetical protein. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity. | 0.867 |
| SDL39710.1 | SDM06473.1 | SAMN04488692_10461 | SAMN04488692_11561 | Putative ATPase. | DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | 0.596 |
| SDL39710.1 | SDM16153.1 | SAMN04488692_10461 | SAMN04488692_11913 | Putative ATPase. | DNA polymerase III, delta prime subunit. | 0.427 |
| SDL39710.1 | polA | SAMN04488692_10461 | SAMN04488692_11223 | Putative ATPase. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity. | 0.752 |
| SDL56085.1 | SDL15220.1 | SAMN04488692_105164 | SAMN04488692_1027 | DnaB-like helicase C terminal domain-containing protein. | Hypothetical protein. | 0.683 |
| SDL56085.1 | SDM16153.1 | SAMN04488692_105164 | SAMN04488692_11913 | DnaB-like helicase C terminal domain-containing protein. | DNA polymerase III, delta prime subunit. | 0.462 |
| SDL56085.1 | SDM26809.1 | SAMN04488692_105164 | SAMN04488692_1249 | DnaB-like helicase C terminal domain-containing protein. | DNA primase, catalytic core. | 0.720 |
| SDL56085.1 | dnaG | SAMN04488692_105164 | SAMN04488692_10489 | DnaB-like helicase C terminal domain-containing protein. | DNA primase; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication. | 0.720 |
| SDL56085.1 | dnaX | SAMN04488692_105164 | SAMN04488692_11921 | DnaB-like helicase C terminal domain-containing protein. | DNA polymerase III, tau subunit; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity. | 0.410 |
| SDL56085.1 | polA | SAMN04488692_105164 | SAMN04488692_11223 | DnaB-like helicase C terminal domain-containing protein. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity. | 0.568 |
| SDL84721.1 | SDM28897.1 | SAMN04488692_11045 | SAMN04488692_1252 | DNA helicase, putative. | Protein of unknown function. | 0.449 |
| SDL86056.1 | SDM05735.1 | SAMN04488692_11081 | SAMN04488692_11540 | DNA polymerase-3 subunit alpha. | Single-strand DNA-binding protein. | 0.906 |
| SDL86056.1 | SDM06473.1 | SAMN04488692_11081 | SAMN04488692_11561 | DNA polymerase-3 subunit alpha. | DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | 0.991 |
| SDL86056.1 | SDM16153.1 | SAMN04488692_11081 | SAMN04488692_11913 | DNA polymerase-3 subunit alpha. | DNA polymerase III, delta prime subunit. | 0.983 |
| SDL86056.1 | SDM19622.1 | SAMN04488692_11081 | SAMN04488692_1212 | DNA polymerase-3 subunit alpha. | Single-strand binding protein. | 0.908 |
| SDL86056.1 | SDM37886.1 | SAMN04488692_11081 | SAMN04488692_13029 | DNA polymerase-3 subunit alpha. | DNA polymerase III, delta subunit. | 0.990 |
| SDL86056.1 | dnaG | SAMN04488692_11081 | SAMN04488692_10489 | DNA polymerase-3 subunit alpha. | DNA primase; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication. | 0.630 |
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