27 items (Physcomitrella patens) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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Predicted Interactions

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Your Input:
	PHYPA_022948	MRP-S28 domain-containing protein. (248 aa)
	PHYPA_015695	Uncharacterized protein; Belongs to the universal ribosomal protein uS9 family. (225 aa)
	PHYPA_015030	Uncharacterized protein; Belongs to the universal ribosomal protein uS17 family. (143 aa)
	PHYPA_015386	Uncharacterized protein. (502 aa)
	PHYPA_000351	Uncharacterized protein. (155 aa)
	PHYPA_011630	Predicted protein; Belongs to the universal ribosomal protein uS5 family. (346 aa)
	rpl2	50S ribosomal protein L2, chloroplastic; Belongs to the universal ribosomal protein uL2 family. (277 aa)
	rps11	Ribosomal protein S11; Belongs to the universal ribosomal protein uS11 family. (118 aa)
	rps14	Ribosomal protein S14. (99 aa)
	rpl2-2	Ribosomal protein L2. (463 aa)
	rps7	Ribosomal protein S7. (239 aa)
	rps12	Ribosomal protein S12; Belongs to the universal ribosomal protein uS12 family. (126 aa)
	rpl36	50S ribosomal protein L36, chloroplastic. (37 aa)
	rps11-2	30S ribosomal protein S11, chloroplastic; Belongs to the universal ribosomal protein uS11 family. (130 aa)
	rps2-2	30S ribosomal protein S2, chloroplastic. (236 aa)
	rps19-2	30S ribosomal protein S19, chloroplastic; Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA. (92 aa)
	rpl22	50S ribosomal protein L22, chloroplastic; This protein binds specifically to 23S rRNA; Belongs to the universal ribosomal protein uL22 family. (118 aa)
	rps3-2	30S ribosomal protein S3, chloroplastic; Belongs to the universal ribosomal protein uS3 family. (218 aa)
	rpl16-2	50S ribosomal protein L16, chloroplastic; Belongs to the universal ribosomal protein uL16 family. (138 aa)
	rpl14	50S ribosomal protein L14, chloroplastic; Binds to 23S rRNA. (122 aa)
	rps8	30S ribosomal protein S8, chloroplastic; One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit. (132 aa)
	rps18	30S ribosomal protein S18, chloroplastic; Belongs to the bacterial ribosomal protein bS18 family. (79 aa)
	rpl20	50S ribosomal protein L20, chloroplastic; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit. (115 aa)
	rps12-2	30S ribosomal protein S12, chloroplastic; With S4 and S5 plays an important role in translational accuracy. Located at the interface of the 30S and 50S subunits (By similarity). (123 aa)
	rps15	30S ribosomal protein S15, chloroplastic; Belongs to the universal ribosomal protein uS15 family. (88 aa)
	rps7-2	30S ribosomal protein S7, chloroplastic; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. (155 aa)
	rps14-2	30S ribosomal protein S14, chloroplastic; Binds 16S rRNA, required for the assembly of 30S particles. (100 aa)

Your Current Organism:

Physcomitrella patens

NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
PHYPA_000351	PHYPA_011630	A0A2K1L7C6	A9SSR6	Uncharacterized protein.	Predicted protein; Belongs to the universal ribosomal protein uS5 family.	0.988
PHYPA_000351	PHYPA_015030	A0A2K1L7C6	A0A2K1JUQ4	Uncharacterized protein.	Uncharacterized protein; Belongs to the universal ribosomal protein uS17 family.	0.942
PHYPA_000351	PHYPA_015386	A0A2K1L7C6	A0A2K1JVR1	Uncharacterized protein.	Uncharacterized protein.	0.979
PHYPA_000351	PHYPA_015695	A0A2K1L7C6	A0A2K1JP42	Uncharacterized protein.	Uncharacterized protein; Belongs to the universal ribosomal protein uS9 family.	0.986
PHYPA_000351	PHYPA_022948	A0A2K1L7C6	A0A2K1J0K1	Uncharacterized protein.	MRP-S28 domain-containing protein.	0.971
PHYPA_000351	rpl14	A0A2K1L7C6	Q6YXL0	Uncharacterized protein.	50S ribosomal protein L14, chloroplastic; Binds to 23S rRNA.	0.925
PHYPA_000351	rpl16-2	A0A2K1L7C6	Q6YXK9	Uncharacterized protein.	50S ribosomal protein L16, chloroplastic; Belongs to the universal ribosomal protein uL16 family.	0.924
PHYPA_000351	rpl2	A0A2K1L7C6	P60407	Uncharacterized protein.	50S ribosomal protein L2, chloroplastic; Belongs to the universal ribosomal protein uL2 family.	0.969
PHYPA_000351	rpl2-2	A0A2K1L7C6	Q1XGA1	Uncharacterized protein.	Ribosomal protein L2.	0.965
PHYPA_000351	rpl20	A0A2K1L7C6	Q6YXM5	Uncharacterized protein.	50S ribosomal protein L20, chloroplastic; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit.	0.984
PHYPA_000351	rpl22	A0A2K1L7C6	Q6YXK7	Uncharacterized protein.	50S ribosomal protein L22, chloroplastic; This protein binds specifically to 23S rRNA; Belongs to the universal ribosomal protein uL22 family.	0.959
PHYPA_000351	rpl36	A0A2K1L7C6	Q6YXJ7	Uncharacterized protein.	50S ribosomal protein L36, chloroplastic.	0.984
PHYPA_000351	rps11	A0A2K1L7C6	Q1XG93	Uncharacterized protein.	Ribosomal protein S11; Belongs to the universal ribosomal protein uS11 family.	0.957
PHYPA_000351	rps11-2	A0A2K1L7C6	Q6YXJ8	Uncharacterized protein.	30S ribosomal protein S11, chloroplastic; Belongs to the universal ribosomal protein uS11 family.	0.968
PHYPA_000351	rps12	A0A2K1L7C6	Q1XGB3	Uncharacterized protein.	Ribosomal protein S12; Belongs to the universal ribosomal protein uS12 family.	0.988
PHYPA_000351	rps12-2	A0A2K1L7C6	Q6YXM6	Uncharacterized protein.	30S ribosomal protein S12, chloroplastic; With S4 and S5 plays an important role in translational accuracy. Located at the interface of the 30S and 50S subunits (By similarity).	0.988
PHYPA_000351	rps14	A0A2K1L7C6	Q1XG96	Uncharacterized protein.	Ribosomal protein S14.	0.978
PHYPA_000351	rps14-2	A0A2K1L7C6	Q8MFA1	Uncharacterized protein.	30S ribosomal protein S14, chloroplastic; Binds 16S rRNA, required for the assembly of 30S particles.	0.980
PHYPA_000351	rps15	A0A2K1L7C6	Q6YXP6	Uncharacterized protein.	30S ribosomal protein S15, chloroplastic; Belongs to the universal ribosomal protein uS15 family.	0.984
PHYPA_000351	rps18	A0A2K1L7C6	Q6YXM4	Uncharacterized protein.	30S ribosomal protein S18, chloroplastic; Belongs to the bacterial ribosomal protein bS18 family.	0.977

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