15 items (Physcomitrella patens) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	PHYPA_029079	Uncharacterized protein. (257 aa)
	PHYPA_026597	Glyco_18 domain-containing protein; Belongs to the glycosyl hydrolase 18 family. (439 aa)
	PHYPA_023565	Uncharacterized protein. (659 aa)
	PHYPA_020657	DUF667 domain-containing protein. (304 aa)
	PHYPA_015693	Uncharacterized protein. (653 aa)
	PHYPA_014300	Uncharacterized protein. (494 aa)
	PHYPA_012756	DUF667 domain-containing protein. (682 aa)
	PHYPA_008863	DUF667 domain-containing protein. (218 aa)
	PHYPA_006343	Uncharacterized protein. (338 aa)
	PHYPA_006905	Uncharacterized protein. (292 aa)
	PHYPA_006923	Enkurin domain-containing protein. (258 aa)
	PHYPA_021318	Predicted protein. (380 aa)
	PHYPA_014360	Predicted protein. (366 aa)
	PHYPA_010068	Predicted protein. (204 aa)
	PHYPA_013082	Predicted protein. (309 aa)

Your Current Organism:

Physcomitrella patens

NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
PHYPA_006343	PHYPA_006905	A0A2K1KNV8	A0A2K1KQG6	Uncharacterized protein.	Uncharacterized protein.	0.808
PHYPA_006343	PHYPA_006923	A0A2K1KNV8	A0A2K1KQJ2	Uncharacterized protein.	Enkurin domain-containing protein.	0.589
PHYPA_006343	PHYPA_008863	A0A2K1KNV8	A0A2K1KFF4	Uncharacterized protein.	DUF667 domain-containing protein.	0.638
PHYPA_006343	PHYPA_010068	A0A2K1KNV8	A9S251	Uncharacterized protein.	Predicted protein.	0.638
PHYPA_006343	PHYPA_012756	A0A2K1KNV8	A0A2K1K3D3	Uncharacterized protein.	DUF667 domain-containing protein.	0.638
PHYPA_006343	PHYPA_013082	A0A2K1KNV8	A9TIG1	Uncharacterized protein.	Predicted protein.	0.901
PHYPA_006343	PHYPA_014360	A0A2K1KNV8	A9RW11	Uncharacterized protein.	Predicted protein.	0.646
PHYPA_006343	PHYPA_015693	A0A2K1KNV8	A0A2K1JP31	Uncharacterized protein.	Uncharacterized protein.	0.852
PHYPA_006343	PHYPA_020657	A0A2K1KNV8	A0A2K1J7Q3	Uncharacterized protein.	DUF667 domain-containing protein.	0.638
PHYPA_006343	PHYPA_021318	A0A2K1KNV8	A9RE77	Uncharacterized protein.	Predicted protein.	0.808
PHYPA_006343	PHYPA_026597	A0A2K1KNV8	A0A2K1ILY0	Uncharacterized protein.	Glyco_18 domain-containing protein; Belongs to the glycosyl hydrolase 18 family.	0.622
PHYPA_006343	PHYPA_029079	A0A2K1KNV8	A0A2K1IGT5	Uncharacterized protein.	Uncharacterized protein.	0.589
PHYPA_006905	PHYPA_006343	A0A2K1KQG6	A0A2K1KNV8	Uncharacterized protein.	Uncharacterized protein.	0.808
PHYPA_006905	PHYPA_006923	A0A2K1KQG6	A0A2K1KQJ2	Uncharacterized protein.	Enkurin domain-containing protein.	0.923
PHYPA_006905	PHYPA_008863	A0A2K1KQG6	A0A2K1KFF4	Uncharacterized protein.	DUF667 domain-containing protein.	0.819
PHYPA_006905	PHYPA_010068	A0A2K1KQG6	A9S251	Uncharacterized protein.	Predicted protein.	0.819
PHYPA_006905	PHYPA_012756	A0A2K1KQG6	A0A2K1K3D3	Uncharacterized protein.	DUF667 domain-containing protein.	0.819
PHYPA_006905	PHYPA_013082	A0A2K1KQG6	A9TIG1	Uncharacterized protein.	Predicted protein.	0.915
PHYPA_006905	PHYPA_014360	A0A2K1KQG6	A9RW11	Uncharacterized protein.	Predicted protein.	0.681
PHYPA_006905	PHYPA_015693	A0A2K1KQG6	A0A2K1JP31	Uncharacterized protein.	Uncharacterized protein.	0.910

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