STRINGSTRING
PHYPA_030748 PHYPA_030748 PHYPA_030797 PHYPA_030797 PHYPA_030313 PHYPA_030313 PHYPA_028597 PHYPA_028597 PHYPA_028354 PHYPA_028354 PHYPA_026523 PHYPA_026523 PHYPA_025562 PHYPA_025562 PHYPA_024715 PHYPA_024715 PHYPA_023151 PHYPA_023151 PHYPA_021531 PHYPA_021531 PHYPA_022463 PHYPA_022463 PHYPA_020294 PHYPA_020294 PHYPA_021070 PHYPA_021070 PHYPA_018128 PHYPA_018128 PHYPA_017704 PHYPA_017704 PHYPA_017804 PHYPA_017804 PHYPA_015671 PHYPA_015671 PHYPA_016006 PHYPA_016006 PHYPA_016142 PHYPA_016142 PHYPA_016640 PHYPA_016640 PHYPA_014400 PHYPA_014400 PHYPA_014715 PHYPA_014715 PHYPA_012690 PHYPA_012690 PHYPA_011095 PHYPA_011095 PHYPA_011141 PHYPA_011141 PHYPA_009458 PHYPA_009458 PHYPA_007497 PHYPA_007497 PHYPA_006445 PHYPA_006445 PHYPA_003801 PHYPA_003801 PHYPA_004837 PHYPA_004837 PHYPA_005276 PHYPA_005276 PHYPA_003411 PHYPA_003411 PHYPA_000130 PHYPA_000130 PHYPA_000462 PHYPA_000462 PHYPA_000485 PHYPA_000485 PHYPA_000691 PHYPA_000691 PHYPA_000782 PHYPA_000782 PHYPA_001696 PHYPA_001696 PHYPA_001768 PHYPA_001768 PHYPA_002190 PHYPA_002190 PHYPA_003308 PHYPA_003308 PHYPA_001637 PHYPA_001637 PHYPA_027269 PHYPA_027269 PHYPA_019788 PHYPA_019788 PHYPA_020773 PHYPA_020773 PHYPA_009791 PHYPA_009791 PHYPA_015564 PHYPA_015564 PHYPA_005277 PHYPA_005277 PHYPA_010390 PHYPA_010390 PHYPA_028015 PHYPA_028015 PHYPA_002926 PHYPA_002926 PHYPA_029392 PHYPA_029392 PHYPA_031151 PHYPA_031151
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
PHYPA_030748Uncharacterized protein. (592 aa)
PHYPA_030797SAM_MT_RSMB_NOP domain-containing protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family. (594 aa)
PHYPA_030313Brix domain-containing protein. (333 aa)
PHYPA_028597Uncharacterized protein. (920 aa)
PHYPA_028354Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily. (674 aa)
PHYPA_026523Uncharacterized protein. (438 aa)
PHYPA_025562Protein SDA1; Required for 60S pre-ribosomal subunits export to the cytoplasm; Belongs to the SDA1 family. (820 aa)
PHYPA_024715Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily. (674 aa)
PHYPA_023151Ribosome biogenesis protein BOP1 homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the WD repeat BOP1/ERB1 family. (779 aa)
PHYPA_021531Uncharacterized protein. (658 aa)
PHYPA_022463Uncharacterized protein. (1049 aa)
PHYPA_020294CP-type G domain-containing protein. (595 aa)
PHYPA_021070G domain-containing protein. (377 aa)
PHYPA_018128DEAD-box ATP-dependent RNA helicase 29. (847 aa)
PHYPA_017704C2H2-type domain-containing protein. (125 aa)
PHYPA_017804Uncharacterized protein. (451 aa)
PHYPA_015671Uncharacterized protein. (679 aa)
PHYPA_016006CP-type G domain-containing protein. (599 aa)
PHYPA_016142Uncharacterized protein. (347 aa)
PHYPA_016640Uncharacterized protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family. (651 aa)
PHYPA_014400RNA helicase. (630 aa)
PHYPA_014715Uncharacterized protein. (1058 aa)
PHYPA_012690Uncharacterized protein. (822 aa)
PHYPA_011095RRM domain-containing protein. (267 aa)
PHYPA_011141Uncharacterized protein. (346 aa)
PHYPA_009458Uncharacterized protein. (312 aa)
PHYPA_007497PUM-HD domain-containing protein. (641 aa)
PHYPA_006445Brix domain-containing protein. (337 aa)
PHYPA_003801zf-LYAR domain-containing protein. (287 aa)
PHYPA_004837Pescadillo homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the pescadillo family. (595 aa)
PHYPA_005276RRM domain-containing protein. (269 aa)
PHYPA_003411Brix domain-containing protein. (515 aa)
PHYPA_000130Nuclear/nucleolar GTPase 2; GTPase involved in pre-60S ribosomal subunit maturation. Belongs to the TRAFAC class YlqF/YawG GTPase family. RsgA subfamily. (650 aa)
PHYPA_000462Brix domain-containing protein. (351 aa)
PHYPA_000485Uncharacterized protein. (505 aa)
PHYPA_000691SAM_MT_RSMB_NOP domain-containing protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family. (671 aa)
PHYPA_000782TRASH domain-containing protein. (169 aa)
PHYPA_001696Protein MAK16 homolog; Belongs to the MAK16 family. (309 aa)
PHYPA_001768Uncharacterized protein. (416 aa)
PHYPA_002190Protein MAK16 homolog; Belongs to the MAK16 family. (311 aa)
PHYPA_003308Putative rRNA methyltransferase; Probable methyltransferase involved in the maturation of rRNA and in the biogenesis of ribosomal subunits. (844 aa)
PHYPA_001637WD_REPEATS_REGION domain-containing protein. (475 aa)
PHYPA_027269Predicted protein. (225 aa)
PHYPA_01978860S ribosome subunit biogenesis protein NIP7 homolog; Required for proper 27S pre-rRNA processing and 60S ribosome subunit assembly; Belongs to the NIP7 family. (186 aa)
PHYPA_020773Predicted protein. (329 aa)
PHYPA_009791Predicted protein. (260 aa)
PHYPA_015564Ribosome assembly factor mrt4; Component of the ribosome assembly machinery. Nuclear paralog of the ribosomal protein P0, it binds pre-60S subunits at an early stage of assembly in the nucleolus, and is replaced by P0 in cytoplasmic pre-60S subunits and mature 80S ribosomes. (232 aa)
PHYPA_005277Ribosome biogenesis regulatory protein; Involved in ribosomal large subunit assembly. Belongs to the RRS1 family. (358 aa)
PHYPA_010390Predicted protein. (399 aa)
PHYPA_028015Ribosome biogenesis protein WDR12 homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the WD repeat WDR12/YTM1 family. (434 aa)
PHYPA_002926Predicted protein. (169 aa)
PHYPA_029392Predicted protein. (184 aa)
PHYPA_031151Ribosome assembly factor mrt4; Component of the ribosome assembly machinery. Nuclear paralog of the ribosomal protein P0, it binds pre-60S subunits at an early stage of assembly in the nucleolus, and is replaced by P0 in cytoplasmic pre-60S subunits and mature 80S ribosomes. (232 aa)
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
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