STRINGSTRING
PHYPA_028583 PHYPA_028583 PHYPA_001330 PHYPA_001330 PHYPA_028579 PHYPA_028579 PHYPA_001590 PHYPA_001590 PHYPA_002615 PHYPA_002615 PHYPA_006126 PHYPA_006126 PHYPA_000170 PHYPA_000170 PHYPA_016498 PHYPA_016498 PHYPA_029777 PHYPA_029777 PHYPA_008423 PHYPA_008423 PHYPA_016028 PHYPA_016028 PHYPA_010848 PHYPA_010848 PHYPA_029334 PHYPA_029334 PHYPA_001493 PHYPA_001493 PHYPA_014671 PHYPA_014671
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
PHYPA_028583Ribos_L4_asso_C domain-containing protein. (459 aa)
PHYPA_001330Ribosomal_L28e domain-containing protein. (151 aa)
PHYPA_028579Ribosomal protein; Belongs to the universal ribosomal protein uL1 family. (216 aa)
PHYPA_00159060S ribosomal protein L29; Belongs to the eukaryotic ribosomal protein eL29 family. (63 aa)
PHYPA_00261560S ribosomal protein L6; Belongs to the eukaryotic ribosomal protein eL6 family. (231 aa)
PHYPA_006126Predicted protein. (260 aa)
PHYPA_000170Predicted protein. (111 aa)
PHYPA_016498Predicted protein; Belongs to the universal ribosomal protein uL23 family. (156 aa)
PHYPA_029777Predicted protein. (112 aa)
PHYPA_008423Predicted protein; Belongs to the universal ribosomal protein uL3 family. (392 aa)
PHYPA_016028Predicted protein. (164 aa)
PHYPA_010848Uncharacterized protein; Belongs to the universal ribosomal protein uL22 family. (186 aa)
PHYPA_02933460S ribosomal protein L27; Belongs to the eukaryotic ribosomal protein eL27 family. (135 aa)
PHYPA_001493Predicted protein. (133 aa)
PHYPA_014671Predicted protein. (293 aa)
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
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