STRINGSTRING
PHYPA_014647 PHYPA_014647 PHYPA_008333 PHYPA_008333 PHYPA_004220 PHYPA_004220 PHYPA_004744 PHYPA_004744 PHYPA_002295 PHYPA_002295 PHYPA_004043 PHYPA_004043 PHYPA_027825 PHYPA_027825 PHYPA_025334 PHYPA_025334 PHYPA_013589 PHYPA_013589 PHYPA_001106 PHYPA_001106 PHYPA_002445 PHYPA_002445 PHYPA_016025 PHYPA_016025 PHYPA_022031 PHYPA_022031 PHYPA_012013 PHYPA_012013 PHYPA_014365 PHYPA_014365 PHYPA_003495 PHYPA_003495
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
PHYPA_014647Uncharacterized protein; Belongs to the universal ribosomal protein uL22 family. (219 aa)
PHYPA_008333Uncharacterized protein. (86 aa)
PHYPA_004220Uncharacterized protein; Belongs to the eukaryotic ribosomal protein eL42 family. (175 aa)
PHYPA_004744Ribosomal_L23eN domain-containing protein; Belongs to the universal ribosomal protein uL23 family. (152 aa)
PHYPA_002295Ribosomal_L28e domain-containing protein. (148 aa)
PHYPA_004043Uncharacterized protein. (164 aa)
PHYPA_027825Predicted protein. (403 aa)
PHYPA_025334Ribosomal protein; Belongs to the universal ribosomal protein uL1 family. (216 aa)
PHYPA_01358960S ribosomal protein L29; Belongs to the eukaryotic ribosomal protein eL29 family. (63 aa)
PHYPA_00110660S ribosomal protein L6; Belongs to the eukaryotic ribosomal protein eL6 family. (228 aa)
PHYPA_00244560S ribosomal protein L36; Belongs to the eukaryotic ribosomal protein eL36 family. (110 aa)
PHYPA_016025Predicted protein. (113 aa)
PHYPA_022031Predicted protein. (133 aa)
PHYPA_01201360S ribosomal protein L27; Belongs to the eukaryotic ribosomal protein eL27 family. (135 aa)
PHYPA_014365Predicted protein; Belongs to the universal ribosomal protein uL3 family. (392 aa)
PHYPA_003495Predicted protein. (293 aa)
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.