STRINGSTRING
PHYPA_003262 PHYPA_003262 PHYPA_018750 PHYPA_018750 PHYPA_000312 PHYPA_000312 PHYPA_019309 PHYPA_019309 PHYPA_020764 PHYPA_020764 PHYPA_016877 PHYPA_016877 PHYPA_017452 PHYPA_017452
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
PHYPA_003262Predicted protein; Belongs to the eukaryotic ribosomal protein eL42 family. (105 aa)
PHYPA_01875060S ribosomal protein L36; Belongs to the eukaryotic ribosomal protein eL36 family. (110 aa)
PHYPA_000312Predicted protein. (293 aa)
PHYPA_01930960S ribosomal protein L27; Belongs to the eukaryotic ribosomal protein eL27 family. (135 aa)
PHYPA_020764Predicted protein. (113 aa)
PHYPA_016877Predicted protein. (164 aa)
PHYPA_017452Predicted protein; Belongs to the universal ribosomal protein uL23 family. (152 aa)
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
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