18 items (Physcomitrella patens) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	PHYPA_010161	Uncharacterized protein. (165 aa)
	PHYPA_010162	Uncharacterized protein. (188 aa)
	PHYPA_005903	Uncharacterized protein. (1994 aa)
	PHYPA_006406	Uncharacterized protein. (490 aa)
	PHYPA_006405	Casc1_N domain-containing protein. (145 aa)
	PHYPA_006923	Enkurin domain-containing protein. (258 aa)
	PHYPA_002793	ARL2_Bind_BART domain-containing protein. (145 aa)
	PHYPA_017212	Predicted protein. (108 aa)
	PHYPA_029507	Inner dynein arm light chain. (245 aa)
	PHYPA_011368	Uncharacterized protein. (634 aa)
	PHYPA_030623	WD_REPEATS_REGION domain-containing protein. (1146 aa)
	PHYPA_028393	Uncharacterized protein. (109 aa)
	PHYPA_025892	Uncharacterized protein. (1740 aa)
	PHYPA_015654	CH_2 domain-containing protein. (425 aa)
	PHYPA_015693	Uncharacterized protein. (653 aa)
	PHYPA_015877	Uncharacterized protein. (808 aa)
	PHYPA_019527	MIP-T3 domain-containing protein. (169 aa)
	PHYPA_029332	Uncharacterized protein. (105 aa)

Your Current Organism:

Physcomitrella patens

NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
PHYPA_005903	PHYPA_015654	A0A2K1KMJ7	A0A2K1JP00	Uncharacterized protein.	CH_2 domain-containing protein.	0.405
PHYPA_005903	PHYPA_030623	A0A2K1KMJ7	A0A2K1ICY7	Uncharacterized protein.	WD_REPEATS_REGION domain-containing protein.	0.459
PHYPA_006406	PHYPA_010161	A0A2K1KNZ8	A0A2K1KB22	Uncharacterized protein.	Uncharacterized protein.	0.432
PHYPA_006923	PHYPA_015693	A0A2K1KQJ2	A0A2K1JP31	Enkurin domain-containing protein.	Uncharacterized protein.	0.961
PHYPA_010161	PHYPA_006406	A0A2K1KB22	A0A2K1KNZ8	Uncharacterized protein.	Uncharacterized protein.	0.432
PHYPA_011368	PHYPA_029507	A0A2K1K6S1	A9THP0	Uncharacterized protein.	Inner dynein arm light chain.	0.670
PHYPA_015654	PHYPA_005903	A0A2K1JP00	A0A2K1KMJ7	CH_2 domain-containing protein.	Uncharacterized protein.	0.405
PHYPA_015693	PHYPA_006923	A0A2K1JP31	A0A2K1KQJ2	Uncharacterized protein.	Enkurin domain-containing protein.	0.961
PHYPA_015693	PHYPA_029507	A0A2K1JP31	A9THP0	Uncharacterized protein.	Inner dynein arm light chain.	0.671
PHYPA_015693	PHYPA_030623	A0A2K1JP31	A0A2K1ICY7	Uncharacterized protein.	WD_REPEATS_REGION domain-containing protein.	0.420
PHYPA_015877	PHYPA_019527	A0A2K1JQ12	A0A2K1JCK8	Uncharacterized protein.	MIP-T3 domain-containing protein.	0.949
PHYPA_015877	PHYPA_025892	A0A2K1JQ12	A0A2K1IR65	Uncharacterized protein.	Uncharacterized protein.	0.958
PHYPA_015877	PHYPA_029507	A0A2K1JQ12	A9THP0	Uncharacterized protein.	Inner dynein arm light chain.	0.658
PHYPA_015877	PHYPA_030623	A0A2K1JQ12	A0A2K1ICY7	Uncharacterized protein.	WD_REPEATS_REGION domain-containing protein.	0.997
PHYPA_019527	PHYPA_015877	A0A2K1JCK8	A0A2K1JQ12	MIP-T3 domain-containing protein.	Uncharacterized protein.	0.949
PHYPA_019527	PHYPA_025892	A0A2K1JCK8	A0A2K1IR65	MIP-T3 domain-containing protein.	Uncharacterized protein.	0.996
PHYPA_019527	PHYPA_029507	A0A2K1JCK8	A9THP0	MIP-T3 domain-containing protein.	Inner dynein arm light chain.	0.421
PHYPA_019527	PHYPA_030623	A0A2K1JCK8	A0A2K1ICY7	MIP-T3 domain-containing protein.	WD_REPEATS_REGION domain-containing protein.	0.898
PHYPA_025892	PHYPA_015877	A0A2K1IR65	A0A2K1JQ12	Uncharacterized protein.	Uncharacterized protein.	0.958
PHYPA_025892	PHYPA_019527	A0A2K1IR65	A0A2K1JCK8	Uncharacterized protein.	MIP-T3 domain-containing protein.	0.996

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