16 items (Physcomitrella patens) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	PHYPA_010537	S5 DRBM domain-containing protein; Belongs to the universal ribosomal protein uS5 family. (293 aa)
	PHYPA_005841	Uncharacterized protein; Belongs to the universal ribosomal protein uS9 family. (258 aa)
	PHYPA_003944	Ribosomal_S10 domain-containing protein. (245 aa)
	PHYPA_005433	Uncharacterized protein; Belongs to the universal ribosomal protein uS19 family. (75 aa)
	PHYPA_000214	S5 DRBM domain-containing protein; Belongs to the universal ribosomal protein uS5 family. (292 aa)
	PHYPA_004762	Predicted protein. (108 aa)
	PHYPA_011630	Predicted protein; Belongs to the universal ribosomal protein uS5 family. (346 aa)
	rps11	Ribosomal protein S11; Belongs to the universal ribosomal protein uS11 family. (118 aa)
	rps19	Ribosomal protein S19; Belongs to the universal ribosomal protein uS19 family. (93 aa)
	rps7	Ribosomal protein S7. (239 aa)
	rps2	Ribosomal protein S2; Belongs to the universal ribosomal protein uS2 family. (241 aa)
	PHYPA_012133	Uncharacterized protein; Belongs to the bacterial ribosomal protein bS18 family. (336 aa)
	PHYPA_015386	Uncharacterized protein. (502 aa)
	PHYPA_014871	S5 DRBM domain-containing protein; Belongs to the universal ribosomal protein uS5 family. (293 aa)
	PHYPA_019285	Uncharacterized protein. (230 aa)
	PHYPA_022948	MRP-S28 domain-containing protein. (248 aa)

Your Current Organism:

Physcomitrella patens

NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
PHYPA_000214	PHYPA_004762	A0A2K1L6W8	A9S4M2	S5 DRBM domain-containing protein; Belongs to the universal ribosomal protein uS5 family.	Predicted protein.	0.990
PHYPA_000214	PHYPA_005433	A0A2K1L6W8	A0A2K1KXD1	S5 DRBM domain-containing protein; Belongs to the universal ribosomal protein uS5 family.	Uncharacterized protein; Belongs to the universal ribosomal protein uS19 family.	0.789
PHYPA_000214	PHYPA_005841	A0A2K1L6W8	A0A2K1KME2	S5 DRBM domain-containing protein; Belongs to the universal ribosomal protein uS5 family.	Uncharacterized protein; Belongs to the universal ribosomal protein uS9 family.	0.973
PHYPA_000214	PHYPA_010537	A0A2K1L6W8	A0A2K1KC58	S5 DRBM domain-containing protein; Belongs to the universal ribosomal protein uS5 family.	S5 DRBM domain-containing protein; Belongs to the universal ribosomal protein uS5 family.	0.544
PHYPA_000214	PHYPA_011630	A0A2K1L6W8	A9SSR6	S5 DRBM domain-containing protein; Belongs to the universal ribosomal protein uS5 family.	Predicted protein; Belongs to the universal ribosomal protein uS5 family.	0.631
PHYPA_000214	PHYPA_012133	A0A2K1L6W8	A0A2K1K1L0	S5 DRBM domain-containing protein; Belongs to the universal ribosomal protein uS5 family.	Uncharacterized protein; Belongs to the bacterial ribosomal protein bS18 family.	0.931
PHYPA_000214	PHYPA_014871	A0A2K1L6W8	A0A2K1JUA1	S5 DRBM domain-containing protein; Belongs to the universal ribosomal protein uS5 family.	S5 DRBM domain-containing protein; Belongs to the universal ribosomal protein uS5 family.	0.544
PHYPA_000214	PHYPA_015386	A0A2K1L6W8	A0A2K1JVR1	S5 DRBM domain-containing protein; Belongs to the universal ribosomal protein uS5 family.	Uncharacterized protein.	0.980
PHYPA_000214	PHYPA_019285	A0A2K1L6W8	A0A2K1JBW6	S5 DRBM domain-containing protein; Belongs to the universal ribosomal protein uS5 family.	Uncharacterized protein.	0.801
PHYPA_000214	PHYPA_022948	A0A2K1L6W8	A0A2K1J0K1	S5 DRBM domain-containing protein; Belongs to the universal ribosomal protein uS5 family.	MRP-S28 domain-containing protein.	0.983
PHYPA_000214	rps11	A0A2K1L6W8	Q1XG93	S5 DRBM domain-containing protein; Belongs to the universal ribosomal protein uS5 family.	Ribosomal protein S11; Belongs to the universal ribosomal protein uS11 family.	0.907
PHYPA_000214	rps19	A0A2K1L6W8	Q1XGA0	S5 DRBM domain-containing protein; Belongs to the universal ribosomal protein uS5 family.	Ribosomal protein S19; Belongs to the universal ribosomal protein uS19 family.	0.560
PHYPA_000214	rps2	A0A2K1L6W8	Q1XGC8	S5 DRBM domain-containing protein; Belongs to the universal ribosomal protein uS5 family.	Ribosomal protein S2; Belongs to the universal ribosomal protein uS2 family.	0.850
PHYPA_000214	rps7	A0A2K1L6W8	Q1XGB2	S5 DRBM domain-containing protein; Belongs to the universal ribosomal protein uS5 family.	Ribosomal protein S7.	0.966
PHYPA_003944	PHYPA_004762	A0A2K1KT57	A9S4M2	Ribosomal_S10 domain-containing protein.	Predicted protein.	0.807
PHYPA_003944	PHYPA_005433	A0A2K1KT57	A0A2K1KXD1	Ribosomal_S10 domain-containing protein.	Uncharacterized protein; Belongs to the universal ribosomal protein uS19 family.	0.669
PHYPA_003944	PHYPA_005841	A0A2K1KT57	A0A2K1KME2	Ribosomal_S10 domain-containing protein.	Uncharacterized protein; Belongs to the universal ribosomal protein uS9 family.	0.807
PHYPA_003944	PHYPA_011630	A0A2K1KT57	A9SSR6	Ribosomal_S10 domain-containing protein.	Predicted protein; Belongs to the universal ribosomal protein uS5 family.	0.807
PHYPA_003944	PHYPA_012133	A0A2K1KT57	A0A2K1K1L0	Ribosomal_S10 domain-containing protein.	Uncharacterized protein; Belongs to the bacterial ribosomal protein bS18 family.	0.807
PHYPA_003944	PHYPA_015386	A0A2K1KT57	A0A2K1JVR1	Ribosomal_S10 domain-containing protein.	Uncharacterized protein.	0.807

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