STRINGSTRING
PHYPA_001271 PHYPA_001271 PHYPA_015030 PHYPA_015030 PHYPA_000589 PHYPA_000589 PHYPA_001816 PHYPA_001816 PHYPA_031132 PHYPA_031132
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
PHYPA_001271Predicted protein; Belongs to the universal ribosomal protein uS17 family. (160 aa)
PHYPA_015030Uncharacterized protein; Belongs to the universal ribosomal protein uS17 family. (143 aa)
PHYPA_000589Uncharacterized protein; Belongs to the universal ribosomal protein uS17 family. (150 aa)
PHYPA_001816Uncharacterized protein. (116 aa)
PHYPA_031132Predicted protein; Belongs to the universal ribosomal protein uS17 family. (160 aa)
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.