STRINGSTRING
PHYPA_030001 PHYPA_030001 PHYPA_027821 PHYPA_027821 PHYPA_023541 PHYPA_023541 PHYPA_022085 PHYPA_022085 PHYPA_021408 PHYPA_021408 PHYPA_016066 PHYPA_016066 PHYPA_002113 PHYPA_002113 PHYPA_001572 PHYPA_001572 PHYPA_019847 PHYPA_019847
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
PHYPA_030001Uncharacterized protein. (466 aa)
PHYPA_027821B30.2/SPRY domain-containing protein. (310 aa)
PHYPA_023541Uncharacterized protein. (429 aa)
PHYPA_022085Uncharacterized protein. (1364 aa)
PHYPA_021408Uncharacterized protein. (467 aa)
PHYPA_016066B30.2/SPRY domain-containing protein. (638 aa)
PHYPA_002113Uncharacterized protein. (1364 aa)
PHYPA_001572Uncharacterized protein. (1304 aa)
PHYPA_019847Predicted protein. (482 aa)
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
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