STRINGSTRING
PHYPA_021199 PHYPA_021199 PHYPA_029547 PHYPA_029547 PHYPA_008648 PHYPA_008648 PHYPA_002553 PHYPA_002553 PHYPA_014554 PHYPA_014554 PHYPA_000383 PHYPA_000383 PHYPA_001144 PHYPA_001144 PHYPA_002739 PHYPA_002739 PHYPA_004508 PHYPA_004508 PHYPA_006382 PHYPA_006382 PHYPA_010776 PHYPA_010776 PHYPA_012495 PHYPA_012495 PHYPA_013721 PHYPA_013721 PHYPA_019012 PHYPA_019012 PHYPA_019868 PHYPA_019868 PHYPA_030266 PHYPA_030266 PHYPA_029741 PHYPA_029741 PHYPA_020260 PHYPA_020260
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
PHYPA_021199S4 RNA-binding domain-containing protein. (306 aa)
PHYPA_02954740S ribosomal protein S4; Belongs to the eukaryotic ribosomal protein eS4 family. (263 aa)
PHYPA_00864840S ribosomal protein S4; Belongs to the eukaryotic ribosomal protein eS4 family. (263 aa)
PHYPA_002553Predicted protein. (162 aa)
PHYPA_01455440S ribosomal protein S4; Belongs to the eukaryotic ribosomal protein eS4 family. (263 aa)
PHYPA_00038340S ribosomal protein S4; Belongs to the eukaryotic ribosomal protein eS4 family. (263 aa)
PHYPA_001144KOW domain-containing protein. (147 aa)
PHYPA_002739KOW domain-containing protein. (147 aa)
PHYPA_004508KOW domain-containing protein. (108 aa)
PHYPA_006382KOW domain-containing protein. (189 aa)
PHYPA_01077640S ribosomal protein S4; Belongs to the eukaryotic ribosomal protein eS4 family. (297 aa)
PHYPA_012495KOW domain-containing protein; Belongs to the universal ribosomal protein uL24 family. (183 aa)
PHYPA_013721KOW domain-containing protein. (147 aa)
PHYPA_019012KOW domain-containing protein. (147 aa)
PHYPA_019868KOW domain-containing protein; Belongs to the universal ribosomal protein uL24 family. (181 aa)
PHYPA_030266KOW domain-containing protein. (147 aa)
PHYPA_029741Transcription elongation factor SPT5. (1070 aa)
PHYPA_020260Transcription elongation factor SPT5. (1095 aa)
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.