STRINGSTRING
PHYPA_001313 PHYPA_001313 PHYPA_026191 PHYPA_026191 PHYPA_026144 PHYPA_026144 PHYPA_026116 PHYPA_026116 PHYPA_025904 PHYPA_025904 PHYPA_025722 PHYPA_025722 PHYPA_025577 PHYPA_025577 PHYPA_027248 PHYPA_027248 PHYPA_026967 PHYPA_026967 PHYPA_026931 PHYPA_026931 PHYPA_026797 PHYPA_026797 PHYPA_028395 PHYPA_028395 PHYPA_028386 PHYPA_028386 PHYPA_027980 PHYPA_027980 PHYPA_027743 PHYPA_027743 PHYPA_029353 PHYPA_029353 PHYPA_028953 PHYPA_028953 PHYPA_028577 PHYPA_028577 PHYPA_029415 PHYPA_029415 PHYPA_030348 PHYPA_030348 PHYPA_030116 PHYPA_030116 PHYPA_030113 PHYPA_030113 PHYPA_030884 PHYPA_030884 SPO11-1 SPO11-1 PHYPA_003157 PHYPA_003157 PHYPA_022117 PHYPA_022117 PHYPA_013243 PHYPA_013243 PHYPA_007172 PHYPA_007172 PHYPA_014201 PHYPA_014201 PHYPA_013666 PHYPA_013666 PHYPA_015874 PHYPA_015874 PHYPA_030831 PHYPA_030831 PHYPA_000803 PHYPA_000803 PHYPA_025341 PHYPA_025341 PHYPA_018737 PHYPA_018737 PHYPA_015310 PHYPA_015310 PHYPA_001660 PHYPA_001660 PHYPA_028534 PHYPA_028534 PHYPA_022646 PHYPA_022646 PHYPA_022652 PHYPA_022652 PHYPA_014938 PHYPA_014938 PHYPA_017342 PHYPA_017342 PHYPA_001705 PHYPA_001705 PHYPA_001703 PHYPA_001703 PHYPA_001492 PHYPA_001492 PHYPA_001379 PHYPA_001379 PHYPA_001377 PHYPA_001377 PHYPA_000955 PHYPA_000955 PHYPA_000558 PHYPA_000558 PHYPA_000551 PHYPA_000551 PHYPA_000296 PHYPA_000296 PHYPA_000274 PHYPA_000274 PHYPA_000056 PHYPA_000056 PHYPA_003767 PHYPA_003767 PHYPA_003668 PHYPA_003668 PHYPA_003410 PHYPA_003410 PHYPA_003177 PHYPA_003177 PHYPA_002896 PHYPA_002896 PHYPA_002659 PHYPA_002659 PHYPA_002534 PHYPA_002534 PHYPA_002531 PHYPA_002531 PHYPA_002467 PHYPA_002467 PHYPA_002457 PHYPA_002457 PHYPA_002441 PHYPA_002441 PHYPA_002243 PHYPA_002243 PHYPA_002052 PHYPA_002052 PHYPA_005204 PHYPA_005204 PHYPA_004820 PHYPA_004820 PHYPA_004701 PHYPA_004701 PHYPA_013845 PHYPA_013845 PHYPA_020325 PHYPA_020325 PHYPA_007671 PHYPA_007671 PHYPA_024280 PHYPA_024280 SMH1501 SMH1501 PHYPA_008885 PHYPA_008885 PHYPA_019168 PHYPA_019168 PHYPA_008259 PHYPA_008259 PHYPA_017879 PHYPA_017879 PHYPA_010390 PHYPA_010390 PHYPA_009989 PHYPA_009989 PHYPA_021985 PHYPA_021985 PHYPA_030642 PHYPA_030642 PHYPA_028008 PHYPA_028008 E2F;2 E2F;2 PpSig5 PpSig5 Sig1 Sig1 Sig2 Sig2 PHYPA_004378 PHYPA_004378 PHYPA_004316 PHYPA_004316 PHYPA_003896 PHYPA_003896 PHYPA_003848 PHYPA_003848 PHYPA_003861 PHYPA_003861 PHYPA_003851 PHYPA_003851 PHYPA_003865 PHYPA_003865 PHYPA_003850 PHYPA_003850 PHYPA_003854 PHYPA_003854 PHYPA_003815 PHYPA_003815 PHYPA_006400 PHYPA_006400 PHYPA_006167 PHYPA_006167 PHYPA_005926 PHYPA_005926 PHYPA_007885 PHYPA_007885 PHYPA_007757 PHYPA_007757 PHYPA_007202 PHYPA_007202 PHYPA_009475 PHYPA_009475 PHYPA_008997 PHYPA_008997 PHYPA_008789 PHYPA_008789 PHYPA_010715 PHYPA_010715 PHYPA_010126 PHYPA_010126 PHYPA_010099 PHYPA_010099 PHYPA_010019 PHYPA_010019 PHYPA_009920 PHYPA_009920 PHYPA_009906 PHYPA_009906 PHYPA_009813 PHYPA_009813 TOP6A TOP6A PHYPA_012971 PHYPA_012971 PHYPA_013953 PHYPA_013953 PHYPA_013639 PHYPA_013639 PHYPA_013218 PHYPA_013218 PHYPA_015546 PHYPA_015546 PHYPA_015368 PHYPA_015368 PHYPA_015289 PHYPA_015289 PHYPA_015094 PHYPA_015094 PHYPA_016284 PHYPA_016284 PHYPA_015987 PHYPA_015987 PHYPA_015684 PHYPA_015684 PHYPA_017676 PHYPA_017676 PHYPA_017569 PHYPA_017569 PHYPA_017381 PHYPA_017381 PHYPA_016908 PHYPA_016908 PHYPA_016817 PHYPA_016817 PHYPA_018635 PHYPA_018635 PHYPA_017860 PHYPA_017860 PHYPA_017872 PHYPA_017872 PHYPA_020239 PHYPA_020239 PHYPA_020052 PHYPA_020052 PHYPA_019840 PHYPA_019840 PHYPA_019815 PHYPA_019815 PHYPA_021275 PHYPA_021275 PHYPA_020862 PHYPA_020862 PHYPA_020599 PHYPA_020599 PHYPA_020578 PHYPA_020578 PHYPA_020571 PHYPA_020571 PHYPA_022447 PHYPA_022447 PHYPA_022403 PHYPA_022403 PHYPA_022211 PHYPA_022211 PHYPA_023324 PHYPA_023324 PHYPA_023146 PHYPA_023146 PHYPA_023120 PHYPA_023120 PHYPA_022921 PHYPA_022921 PHYPA_022719 PHYPA_022719 PHYPA_022666 PHYPA_022666 RECX RECX PHYPA_023841 PHYPA_023841 PHYPA_025448 PHYPA_025448 PHYPA_024974 PHYPA_024974 PHYPA_024584 PHYPA_024584 PHYPA_026371 PHYPA_026371 PHYPA_026231 PHYPA_026231 PHYPA_026193 PHYPA_026193
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
PHYPA_001313Predicted protein. (142 aa)
PHYPA_026191Eukaryotic translation initiation factor 3 subunit K; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation. (225 aa)
PHYPA_026144NB-ARC domain-containing protein. (560 aa)
PHYPA_026116Uncharacterized protein. (673 aa)
PHYPA_025904Protein kinase domain-containing protein. (845 aa)
PHYPA_025722H15 domain-containing protein. (312 aa)
PHYPA_025577Methyltransf_2 domain-containing protein. (246 aa)
PHYPA_027248HTH_Tnp_Tc3_2 domain-containing protein. (271 aa)
PHYPA_026967Uncharacterized protein. (551 aa)
PHYPA_026931HSF_DOMAIN domain-containing protein. (404 aa)
PHYPA_026797DNA-directed RNA polymerase III subunit RPC6; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Specific peripheric component of RNA polymerase III which synthesizes small RNAs, such as 5S rRNA and tRNAs; Belongs to the eukaryotic RPC34/RPC39 RNA polymerase subunit family. (282 aa)
PHYPA_028395GLUE N-terminal domain-containing protein. (436 aa)
PHYPA_028386Uncharacterized protein. (224 aa)
PHYPA_027980Transcriptional adapter. (631 aa)
PHYPA_027743Uncharacterized protein. (338 aa)
PHYPA_029353Uncharacterized protein. (338 aa)
PHYPA_028953H15 domain-containing protein. (129 aa)
PHYPA_028577Uncharacterized protein. (643 aa)
PHYPA_029415Uncharacterized protein. (854 aa)
PHYPA_030348H15 domain-containing protein. (149 aa)
PHYPA_030116Uncharacterized protein. (264 aa)
PHYPA_030113Uncharacterized protein. (276 aa)
PHYPA_030884Uncharacterized protein. (337 aa)
SPO11-1Meiotic recombination protein. (361 aa)
PHYPA_003157Predicted protein. (394 aa)
PHYPA_022117Predicted protein. (142 aa)
PHYPA_013243Predicted protein. (180 aa)
PHYPA_007172Predicted protein. (292 aa)
PHYPA_014201Predicted protein. (176 aa)
PHYPA_013666Predicted protein. (452 aa)
PHYPA_015874Predicted protein. (378 aa)
PHYPA_030831Predicted protein. (144 aa)
PHYPA_000803Predicted protein. (180 aa)
PHYPA_025341Predicted protein. (311 aa)
PHYPA_018737Predicted protein. (142 aa)
PHYPA_015310Predicted protein; Belongs to the cullin family. (734 aa)
PHYPA_001660Uncharacterized protein. (2180 aa)
PHYPA_028534Predicted protein. (182 aa)
PHYPA_022646Methionine aminopeptidase 2; Cotranslationally removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met- Ala-, Cys, Gly, Pro, Ser, Thr, or Val). (479 aa)
PHYPA_022652Methionine aminopeptidase 2; Cotranslationally removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met- Ala-, Cys, Gly, Pro, Ser, Thr, or Val). (481 aa)
PHYPA_014938Predicted protein. (363 aa)
PHYPA_017342Predicted protein. (128 aa)
PHYPA_001705RNA polymerase sigma factor; Sigma factors are initiation factors that promote the attachment of plastid-encoded RNA polymerase (PEP) to specific initiation sites and are then released. (589 aa)
PHYPA_001703RNA polymerase sigma factor; Sigma factors are initiation factors that promote the attachment of plastid-encoded RNA polymerase (PEP) to specific initiation sites and are then released. (590 aa)
PHYPA_001492HSF_DOMAIN domain-containing protein. (529 aa)
PHYPA_001379Uncharacterized protein. (568 aa)
PHYPA_001377Uncharacterized protein. (583 aa)
PHYPA_000955PCI domain-containing protein. (452 aa)
PHYPA_000558SWIRM domain-containing protein. (233 aa)
PHYPA_000551SWIRM domain-containing protein. (195 aa)
PHYPA_000296E2F_TDP domain-containing protein. (368 aa)
PHYPA_000274SWIRM domain-containing protein. (1803 aa)
PHYPA_000056SWIRM domain-containing protein. (1814 aa)
PHYPA_003767Histone acetyltransferase; Belongs to the MYST (SAS/MOZ) family. (516 aa)
PHYPA_003668SWIRM domain-containing protein. (955 aa)
PHYPA_003410E2F_TDP domain-containing protein. (468 aa)
PHYPA_003177Uncharacterized protein. (662 aa)
PHYPA_002896S10_plectin domain-containing protein. (175 aa)
PHYPA_002659Cell division control protein; Belongs to the CDC6/cdc18 family. (621 aa)
PHYPA_002534Uncharacterized protein. (582 aa)
PHYPA_002531Uncharacterized protein. (582 aa)
PHYPA_002467Uncharacterized protein. (173 aa)
PHYPA_002457Uncharacterized protein. (2124 aa)
PHYPA_002441HSF_DOMAIN domain-containing protein. (525 aa)
PHYPA_002243Uncharacterized protein. (448 aa)
PHYPA_002052Uncharacterized protein. (1315 aa)
PHYPA_005204Uncharacterized protein. (236 aa)
PHYPA_004820DDE_3 domain-containing protein. (327 aa)
PHYPA_004701CULLIN_2 domain-containing protein; Belongs to the cullin family. (826 aa)
PHYPA_013845Vacuolar protein sorting-associated protein; Component of the endosomal sorting complex required for transport II (ESCRT-II), which is required for multivesicular body (MVB) formation and sorting of endosomal cargo proteins into MVBs. Belongs to the SNF8 family. (250 aa)
PHYPA_020325Predicted protein; Belongs to the cullin family. (743 aa)
PHYPA_007671Predicted protein; Belongs to the cullin family. (745 aa)
PHYPA_024280Predicted protein. (665 aa)
SMH1501Single myb histone protein. (345 aa)
PHYPA_008885Predicted protein; Belongs to the cullin family. (743 aa)
PHYPA_019168Predicted protein. (175 aa)
PHYPA_008259Predicted protein. (401 aa)
PHYPA_017879Predicted protein. (177 aa)
PHYPA_010390Predicted protein. (399 aa)
PHYPA_009989Predicted protein; Belongs to the cullin family. (734 aa)
PHYPA_021985Predicted protein. (410 aa)
PHYPA_030642Predicted protein. (285 aa)
PHYPA_028008Predicted protein. (178 aa)
E2F;2E2F transcription factor2. (414 aa)
PpSig5Plastid sigma factor PpSIG5. (632 aa)
Sig1Plastid sigma factor SIG1. (677 aa)
Sig2RNA polymerase sigma factor; Sigma factors are initiation factors that promote the attachment of plastid-encoded RNA polymerase (PEP) to specific initiation sites and are then released. (579 aa)
PHYPA_004378H15 domain-containing protein. (165 aa)
PHYPA_004316Uncharacterized protein; Involved in the regulation of the G1/S transition. Increases the DNA binding activity of E2F proteins after heterodimerization. Belongs to the E2F/DP family. (307 aa)
PHYPA_003896Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family. (541 aa)
PHYPA_003848NB-ARC domain-containing protein. (1005 aa)
PHYPA_003861Uncharacterized protein. (351 aa)
PHYPA_003851NB-ARC domain-containing protein. (834 aa)
PHYPA_003865Protein kinase domain-containing protein. (895 aa)
PHYPA_003850NB-ARC domain-containing protein. (1022 aa)
PHYPA_003854NB-ARC domain-containing protein. (833 aa)
PHYPA_003815NB-ARC domain-containing protein. (986 aa)
PHYPA_006400Histone acetyltransferase; Belongs to the MYST (SAS/MOZ) family. (462 aa)
PHYPA_006167Uncharacterized protein. (241 aa)
PHYPA_005926CULLIN_2 domain-containing protein; Belongs to the cullin family. (802 aa)
PHYPA_007885ATP-dependent DNA helicase; Belongs to the helicase family. RecQ subfamily. (877 aa)
PHYPA_007757Uncharacterized protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. Cation-independent O-methyltransferase family. (401 aa)
PHYPA_007202Uncharacterized protein. (1469 aa)
PHYPA_009475H15 domain-containing protein. (407 aa)
PHYPA_008997Uncharacterized protein. (305 aa)
PHYPA_008789Uncharacterized protein. (316 aa)
PHYPA_010715Uncharacterized protein. (324 aa)
PHYPA_010126HTH La-type RNA-binding domain-containing protein. (1082 aa)
PHYPA_010099HSF_DOMAIN domain-containing protein. (467 aa)
PHYPA_010019Uncharacterized protein. (339 aa)
PHYPA_009920Uncharacterized protein. (338 aa)
PHYPA_009906HSF_DOMAIN domain-containing protein. (455 aa)
PHYPA_009813Uncharacterized protein. (302 aa)
TOP6ADNA topoisomerase 6 subunit A; Component of the DNA topoisomerase VI involved in chromatin organization and progression of endoreduplication cycles. Relaxes both positive and negative superturns and exhibits a strong decatenase activity. (432 aa)
PHYPA_012971Pex14_N domain-containing protein. (325 aa)
PHYPA_013953SWIRM domain-containing protein. (849 aa)
PHYPA_013639Uncharacterized protein. (897 aa)
PHYPA_013218NB-ARC domain-containing protein. (758 aa)
PHYPA_015546HTH La-type RNA-binding domain-containing protein. (1201 aa)
PHYPA_015368CULLIN_2 domain-containing protein; Belongs to the cullin family. (980 aa)
PHYPA_015289HSF_DOMAIN domain-containing protein. (476 aa)
PHYPA_015094Peptidase_M24 domain-containing protein. (345 aa)
PHYPA_016284CULLIN_2 domain-containing protein; Belongs to the cullin family. (820 aa)
PHYPA_015987HTH_Tnp_Tc3_2 domain-containing protein. (222 aa)
PHYPA_015684ATP-dependent DNA helicase; Belongs to the helicase family. RecQ subfamily. (932 aa)
PHYPA_017676Uncharacterized protein. (330 aa)
PHYPA_017569Uncharacterized protein. (618 aa)
PHYPA_017381Histone acetyltransferase; Belongs to the MYST (SAS/MOZ) family. (231 aa)
PHYPA_016908NB-ARC domain-containing protein. (772 aa)
PHYPA_016817HTH myb-type domain-containing protein. (183 aa)
PHYPA_018635SWIRM domain-containing protein. (826 aa)
PHYPA_017860Uncharacterized protein. (437 aa)
PHYPA_017872Uncharacterized protein. (124 aa)
PHYPA_020239Lactamase_B domain-containing protein. (579 aa)
PHYPA_020052Pex14_N domain-containing protein. (315 aa)
PHYPA_019840Uncharacterized protein. (171 aa)
PHYPA_019815TP6A_N domain-containing protein. (196 aa)
PHYPA_021275NB-ARC domain-containing protein. (1010 aa)
PHYPA_020862ERCC4 domain-containing protein. (658 aa)
PHYPA_020599RNA polymerase III subunit C3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (559 aa)
PHYPA_020578Uncharacterized protein. (971 aa)
PHYPA_020571MCU domain-containing protein. (361 aa)
PHYPA_022447Protein kinase domain-containing protein. (473 aa)
PHYPA_022403Protein kinase domain-containing protein. (953 aa)
PHYPA_022211Uncharacterized protein. (328 aa)
PHYPA_023324H15 domain-containing protein. (305 aa)
PHYPA_023146Eukaryotic translation initiation factor 3 subunit K; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation. (228 aa)
PHYPA_023120H15 domain-containing protein. (295 aa)
PHYPA_022921HSF_DOMAIN domain-containing protein. (417 aa)
PHYPA_022719Uncharacterized protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. (2075 aa)
PHYPA_022666Protein kinase domain-containing protein. (1573 aa)
RECXPlant homolog of regulatory protein RecX. (453 aa)
PHYPA_023841H15 domain-containing protein. (140 aa)
PHYPA_025448RIO domain-containing protein. (478 aa)
PHYPA_024974zf-RING-like domain-containing protein. (338 aa)
PHYPA_024584Uncharacterized protein. (1151 aa)
PHYPA_026371HSF_DOMAIN domain-containing protein. (426 aa)
PHYPA_026231Protein kinase domain-containing protein. (1678 aa)
PHYPA_026193Uncharacterized protein. (428 aa)
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
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