STRINGSTRING
HFO1513 HFO1513 HFO1511 HFO1511 PHYPA_023397 PHYPA_023397 PHYPA_018500 PHYPA_018500 PHYPA_014786 PHYPA_014786 PHYPA_029288 PHYPA_029288 PHYPA_007705 PHYPA_007705 HFO1512 HFO1512 PHYPA_009025 PHYPA_009025 PHYPA_030750 PHYPA_030750 PHYPA_031049 PHYPA_031049 PHYPA_028740 PHYPA_028740 PHYPA_027586 PHYPA_027586 PHYPA_025083 PHYPA_025083 PHYPA_023603 PHYPA_023603 PHYPA_022564 PHYPA_022564 PHYPA_020433 PHYPA_020433 PHYPA_018991 PHYPA_018991 PHYPA_015189 PHYPA_015189 PHYPA_015625 PHYPA_015625 PHYPA_013943 PHYPA_013943 PHYPA_011120 PHYPA_011120 PHYPA_011293 PHYPA_011293 PHYPA_011605 PHYPA_011605 PHYPA_011753 PHYPA_011753 PHYPA_008780 PHYPA_008780 PHYPA_009207 PHYPA_009207 PHYPA_009425 PHYPA_009425 PHYPA_007537 PHYPA_007537 PHYPA_007576 PHYPA_007576 PHYPA_008285 PHYPA_008285 PHYPA_006499 PHYPA_006499 PHYPA_005459 PHYPA_005459 GATC GATC
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
HFO1513Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (103 aa)
HFO1511Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (103 aa)
PHYPA_023397Predicted protein. (347 aa)
PHYPA_018500Predicted protein. (486 aa)
PHYPA_014786Small ubiquitin-related modifier. (106 aa)
PHYPA_029288Predicted protein; Belongs to the ubiquitin-conjugating enzyme family. (160 aa)
PHYPA_007705Predicted protein. (358 aa)
HFO1512Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (103 aa)
PHYPA_009025Predicted protein. (358 aa)
PHYPA_030750Uncharacterized protein. (2032 aa)
PHYPA_031049Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (195 aa)
PHYPA_028740Uncharacterized protein. (528 aa)
PHYPA_027586Uncharacterized protein. (2060 aa)
PHYPA_025083Uncharacterized protein. (2107 aa)
PHYPA_023603Uncharacterized protein. (92 aa)
PHYPA_022564Uncharacterized protein. (325 aa)
PHYPA_020433Nuclear pore complex protein Nup85; Functions as a component of the nuclear pore complex (NPC). (747 aa)
PHYPA_018991Uncharacterized protein. (327 aa)
PHYPA_015189Uncharacterized protein. (466 aa)
PHYPA_015625DUF5311 domain-containing protein. (1495 aa)
PHYPA_013943Nup54 domain-containing protein. (463 aa)
PHYPA_011120Uncharacterized protein. (1517 aa)
PHYPA_011293TPR_MLP1_2 domain-containing protein. (2355 aa)
PHYPA_011605Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC). (1137 aa)
PHYPA_011753UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family. (148 aa)
PHYPA_008780Ubiquitin-like domain-containing protein. (209 aa)
PHYPA_009207Nuclear pore protein. (861 aa)
PHYPA_009425Uncharacterized protein. (849 aa)
PHYPA_007537Uncharacterized protein. (369 aa)
PHYPA_007576Uncharacterized protein. (2059 aa)
PHYPA_008285Uncharacterized protein; Belongs to the WD repeat SEC13 family. (334 aa)
PHYPA_006499Uncharacterized protein. (1914 aa)
PHYPA_005459Uncharacterized protein. (253 aa)
GATCGlutamyl-tRNA(Gln) amidotransferase subunit C, chloroplastic/mitochondrial; Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in chloroplasts and mitochondria. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln). Belongs to the GatC family. (139 aa)
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
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