STRINGSTRING
PHYPA_004744 PHYPA_004744 PHYPA_000609 PHYPA_000609 PHYPA_016498 PHYPA_016498 PHYPA_005966 PHYPA_005966 PHYPA_017452 PHYPA_017452 rpl23 rpl23
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
PHYPA_004744Ribosomal_L23eN domain-containing protein; Belongs to the universal ribosomal protein uL23 family. (152 aa)
PHYPA_000609Uncharacterized protein. (119 aa)
PHYPA_016498Predicted protein; Belongs to the universal ribosomal protein uL23 family. (156 aa)
PHYPA_005966Predicted protein; Belongs to the universal ribosomal protein uL23 family. (155 aa)
PHYPA_017452Predicted protein; Belongs to the universal ribosomal protein uL23 family. (152 aa)
rpl2350S ribosomal protein L23, chloroplastic; Binds to 23S rRNA. (91 aa)
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
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