7 items (Physcomitrella patens) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	PHYPA_027393	Predicted protein; Belongs to the universal ribosomal protein uS9 family. (144 aa)
	PHYPA_015695	Uncharacterized protein; Belongs to the universal ribosomal protein uS9 family. (225 aa)
	PHYPA_012303	Uncharacterized protein; Belongs to the universal ribosomal protein uS9 family. (200 aa)
	PHYPA_005841	Uncharacterized protein; Belongs to the universal ribosomal protein uS9 family. (258 aa)
	PHYPA_022606	Predicted protein; Belongs to the universal ribosomal protein uS9 family. (144 aa)
	PHYPA_012266	Predicted protein; Belongs to the universal ribosomal protein uS9 family. (143 aa)
	PHYPA_024432	Predicted protein; Belongs to the universal ribosomal protein uS9 family. (144 aa)

Your Current Organism:

Physcomitrella patens

NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.

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structured XML interaction data, according to the 'PSI-MI' data standard

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
PHYPA_005841	PHYPA_012266	A0A2K1KME2	A9TBI3	Uncharacterized protein; Belongs to the universal ribosomal protein uS9 family.	Predicted protein; Belongs to the universal ribosomal protein uS9 family.	0.880
PHYPA_005841	PHYPA_012303	A0A2K1KME2	A0A2K1K235	Uncharacterized protein; Belongs to the universal ribosomal protein uS9 family.	Uncharacterized protein; Belongs to the universal ribosomal protein uS9 family.	0.906
PHYPA_005841	PHYPA_015695	A0A2K1KME2	A0A2K1JP42	Uncharacterized protein; Belongs to the universal ribosomal protein uS9 family.	Uncharacterized protein; Belongs to the universal ribosomal protein uS9 family.	0.909
PHYPA_005841	PHYPA_022606	A0A2K1KME2	A9RMV9	Uncharacterized protein; Belongs to the universal ribosomal protein uS9 family.	Predicted protein; Belongs to the universal ribosomal protein uS9 family.	0.880
PHYPA_005841	PHYPA_024432	A0A2K1KME2	A9TQQ5	Uncharacterized protein; Belongs to the universal ribosomal protein uS9 family.	Predicted protein; Belongs to the universal ribosomal protein uS9 family.	0.880
PHYPA_005841	PHYPA_027393	A0A2K1KME2	A9TGH1	Uncharacterized protein; Belongs to the universal ribosomal protein uS9 family.	Predicted protein; Belongs to the universal ribosomal protein uS9 family.	0.880
PHYPA_012266	PHYPA_005841	A9TBI3	A0A2K1KME2	Predicted protein; Belongs to the universal ribosomal protein uS9 family.	Uncharacterized protein; Belongs to the universal ribosomal protein uS9 family.	0.880
PHYPA_012266	PHYPA_012303	A9TBI3	A0A2K1K235	Predicted protein; Belongs to the universal ribosomal protein uS9 family.	Uncharacterized protein; Belongs to the universal ribosomal protein uS9 family.	0.880
PHYPA_012266	PHYPA_015695	A9TBI3	A0A2K1JP42	Predicted protein; Belongs to the universal ribosomal protein uS9 family.	Uncharacterized protein; Belongs to the universal ribosomal protein uS9 family.	0.880
PHYPA_012266	PHYPA_022606	A9TBI3	A9RMV9	Predicted protein; Belongs to the universal ribosomal protein uS9 family.	Predicted protein; Belongs to the universal ribosomal protein uS9 family.	0.543
PHYPA_012266	PHYPA_024432	A9TBI3	A9TQQ5	Predicted protein; Belongs to the universal ribosomal protein uS9 family.	Predicted protein; Belongs to the universal ribosomal protein uS9 family.	0.543
PHYPA_012266	PHYPA_027393	A9TBI3	A9TGH1	Predicted protein; Belongs to the universal ribosomal protein uS9 family.	Predicted protein; Belongs to the universal ribosomal protein uS9 family.	0.543
PHYPA_012303	PHYPA_005841	A0A2K1K235	A0A2K1KME2	Uncharacterized protein; Belongs to the universal ribosomal protein uS9 family.	Uncharacterized protein; Belongs to the universal ribosomal protein uS9 family.	0.906
PHYPA_012303	PHYPA_012266	A0A2K1K235	A9TBI3	Uncharacterized protein; Belongs to the universal ribosomal protein uS9 family.	Predicted protein; Belongs to the universal ribosomal protein uS9 family.	0.880
PHYPA_012303	PHYPA_015695	A0A2K1K235	A0A2K1JP42	Uncharacterized protein; Belongs to the universal ribosomal protein uS9 family.	Uncharacterized protein; Belongs to the universal ribosomal protein uS9 family.	0.901
PHYPA_012303	PHYPA_022606	A0A2K1K235	A9RMV9	Uncharacterized protein; Belongs to the universal ribosomal protein uS9 family.	Predicted protein; Belongs to the universal ribosomal protein uS9 family.	0.880
PHYPA_012303	PHYPA_024432	A0A2K1K235	A9TQQ5	Uncharacterized protein; Belongs to the universal ribosomal protein uS9 family.	Predicted protein; Belongs to the universal ribosomal protein uS9 family.	0.880
PHYPA_012303	PHYPA_027393	A0A2K1K235	A9TGH1	Uncharacterized protein; Belongs to the universal ribosomal protein uS9 family.	Predicted protein; Belongs to the universal ribosomal protein uS9 family.	0.880
PHYPA_015695	PHYPA_005841	A0A2K1JP42	A0A2K1KME2	Uncharacterized protein; Belongs to the universal ribosomal protein uS9 family.	Uncharacterized protein; Belongs to the universal ribosomal protein uS9 family.	0.909
PHYPA_015695	PHYPA_012266	A0A2K1JP42	A9TBI3	Uncharacterized protein; Belongs to the universal ribosomal protein uS9 family.	Predicted protein; Belongs to the universal ribosomal protein uS9 family.	0.880

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