Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| atp4 | atpA | Q1XGD1 | Q6YXK3 | ATPase subunit 4. | ATP synthase subunit alpha, chloroplastic; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit. Belongs to the ATPase alpha/beta chains family. | 0.585 |
| atp4 | cox1 | Q1XGD1 | Q1XGD3 | ATPase subunit 4. | Cytochrome c oxidase subunit 1; Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1-3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B. | 0.847 |
| atp4 | rpl16 | Q1XGD1 | Q1XG98 | ATPase subunit 4. | Ribosomal protein L16; Belongs to the universal ribosomal protein uL16 family. | 0.703 |
| atp4 | rpl16-2 | Q1XGD1 | Q6YXK9 | ATPase subunit 4. | 50S ribosomal protein L16, chloroplastic; Belongs to the universal ribosomal protein uL16 family. | 0.721 |
| atp4 | rpl2 | Q1XGD1 | P60407 | ATPase subunit 4. | 50S ribosomal protein L2, chloroplastic; Belongs to the universal ribosomal protein uL2 family. | 0.800 |
| atp4 | rpl2-2 | Q1XGD1 | Q1XGA1 | ATPase subunit 4. | Ribosomal protein L2. | 0.793 |
| atp4 | rps7 | Q1XGD1 | Q1XGB2 | ATPase subunit 4. | Ribosomal protein S7. | 0.707 |
| atp4 | rps7-2 | Q1XGD1 | Q6YXS0 | ATPase subunit 4. | 30S ribosomal protein S7, chloroplastic; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. | 0.702 |
| atpA | atp4 | Q6YXK3 | Q1XGD1 | ATP synthase subunit alpha, chloroplastic; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit. Belongs to the ATPase alpha/beta chains family. | ATPase subunit 4. | 0.585 |
| atpA | cox1 | Q6YXK3 | Q1XGD3 | ATP synthase subunit alpha, chloroplastic; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit. Belongs to the ATPase alpha/beta chains family. | Cytochrome c oxidase subunit 1; Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1-3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B. | 0.708 |
| atpA | ndhB | Q6YXK3 | Q6YXR9 | ATP synthase subunit alpha, chloroplastic; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit. Belongs to the ATPase alpha/beta chains family. | NAD(P)H-quinone oxidoreductase subunit 2, chloroplastic; NDH shuttles electrons from NAD(P)H:plastoquinone, via FMN and iron-sulfur (Fe-S) centers, to quinones in the photosynthetic chain and possibly in a chloroplast respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone. Couples the redox reaction to proton translocation, and thus conserves the redox energy in a proton gradient. | 0.759 |
| atpA | petD | Q6YXK3 | Q6YXR5 | ATP synthase subunit alpha, chloroplastic; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit. Belongs to the ATPase alpha/beta chains family. | Cytochrome b6-f complex subunit 4; Component of the cytochrome b6-f complex, which mediates electron transfer between photosystem II (PSII) and photosystem I (PSI), cyclic electron flow around PSI, and state transitions. | 0.804 |
| atpA | rbcL | Q6YXK3 | P34915 | ATP synthase subunit alpha, chloroplastic; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit. Belongs to the ATPase alpha/beta chains family. | Ribulose bisphosphate carboxylase large chain; RuBisCO catalyzes two reactions: the carboxylation of D- ribulose 1,5-bisphosphate, the primary event in carbon dioxide fixation, as well as the oxidative fragmentation of the pentose substrate in the photorespiration process. Both reactions occur simultaneously and in competition at the same active site. Belongs to the RuBisCO large chain family. Type I subfamily. | 0.847 |
| atpA | rpl14 | Q6YXK3 | Q6YXL0 | ATP synthase subunit alpha, chloroplastic; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit. Belongs to the ATPase alpha/beta chains family. | 50S ribosomal protein L14, chloroplastic; Binds to 23S rRNA. | 0.815 |
| atpA | rpl16 | Q6YXK3 | Q1XG98 | ATP synthase subunit alpha, chloroplastic; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit. Belongs to the ATPase alpha/beta chains family. | Ribosomal protein L16; Belongs to the universal ribosomal protein uL16 family. | 0.858 |
| atpA | rpl16-2 | Q6YXK3 | Q6YXK9 | ATP synthase subunit alpha, chloroplastic; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit. Belongs to the ATPase alpha/beta chains family. | 50S ribosomal protein L16, chloroplastic; Belongs to the universal ribosomal protein uL16 family. | 0.895 |
| atpA | rpl2 | Q6YXK3 | P60407 | ATP synthase subunit alpha, chloroplastic; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit. Belongs to the ATPase alpha/beta chains family. | 50S ribosomal protein L2, chloroplastic; Belongs to the universal ribosomal protein uL2 family. | 0.950 |
| atpA | rpl2-2 | Q6YXK3 | Q1XGA1 | ATP synthase subunit alpha, chloroplastic; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit. Belongs to the ATPase alpha/beta chains family. | Ribosomal protein L2. | 0.938 |
| atpA | rps7 | Q6YXK3 | Q1XGB2 | ATP synthase subunit alpha, chloroplastic; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit. Belongs to the ATPase alpha/beta chains family. | Ribosomal protein S7. | 0.872 |
| atpA | rps7-2 | Q6YXK3 | Q6YXS0 | ATP synthase subunit alpha, chloroplastic; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit. Belongs to the ATPase alpha/beta chains family. | 30S ribosomal protein S7, chloroplastic; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. | 0.900 |
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