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atp1 atp1 PHYPA_026881 PHYPA_026881 PHYPA_027319 PHYPA_027319 PHYPA_010923 PHYPA_010923 PHYPA_023601 PHYPA_023601 rpl2 rpl2 rps14 rps14 rpl5 rpl5 rpl16 rpl16 rps19 rps19 rpl2-2 rpl2-2 nad3 nad3 nad1 nad1 cox2 cox2 rps7 rps7 nad4 nad4 nad5 nad5 sdh3 sdh3 sdh4 sdh4 rps2 rps2 rps1 rps1 atp8 atp8 rps2-2 rps2-2 atpA atpA rps19-2 rps19-2 rpl16-2 rpl16-2 rps7-2 rps7-2 rps14-2 rps14-2 nad7 nad7
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
atp1ATP synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane. (518 aa)
PHYPA_026881Predicted protein; Electron carrier protein. The oxidized form of the cytochrome c heme group can accept an electron from the heme group of the cytochrome c1 subunit of cytochrome reductase. Cytochrome c then transfers this electron to the cytochrome oxidase complex, the final protein carrier in the mitochondrial electron-transport chain. (113 aa)
PHYPA_027319Predicted protein; Electron carrier protein. The oxidized form of the cytochrome c heme group can accept an electron from the heme group of the cytochrome c1 subunit of cytochrome reductase. Cytochrome c then transfers this electron to the cytochrome oxidase complex, the final protein carrier in the mitochondrial electron-transport chain. (111 aa)
PHYPA_010923Cytochrome c domain-containing protein; Electron carrier protein. The oxidized form of the cytochrome c heme group can accept an electron from the heme group of the cytochrome c1 subunit of cytochrome reductase. Cytochrome c then transfers this electron to the cytochrome oxidase complex, the final protein carrier in the mitochondrial electron-transport chain. (113 aa)
PHYPA_023601Predicted protein; Electron carrier protein. The oxidized form of the cytochrome c heme group can accept an electron from the heme group of the cytochrome c1 subunit of cytochrome reductase. Cytochrome c then transfers this electron to the cytochrome oxidase complex, the final protein carrier in the mitochondrial electron-transport chain. (113 aa)
rpl250S ribosomal protein L2, chloroplastic; Belongs to the universal ribosomal protein uL2 family. (277 aa)
rps14Ribosomal protein S14. (99 aa)
rpl5Ribosomal protein L5; Belongs to the universal ribosomal protein uL5 family. (186 aa)
rpl16Ribosomal protein L16; Belongs to the universal ribosomal protein uL16 family. (135 aa)
rps19Ribosomal protein S19; Belongs to the universal ribosomal protein uS19 family. (93 aa)
rpl2-2Ribosomal protein L2. (463 aa)
nad3NADH-ubiquinone oxidoreductase chain 3; Core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that is believed to belong to the minimal assembly required for catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone. (118 aa)
nad1NADH-ubiquinone oxidoreductase chain 1; Belongs to the complex I subunit 1 family. (328 aa)
cox2Cytochrome c oxidase subunit 2; Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1-3 form the functional core of the enzyme complex. Subunit 2 transfers the electrons from cytochrome c via its binuclear copper A center to the bimetallic center of the catalytic subunit 1. (253 aa)
rps7Ribosomal protein S7. (239 aa)
nad4NADH-ubiquinone oxidoreductase chain 4; Core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that is believed to belong to the minimal assembly required for catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone. (495 aa)
nad5NADH-ubiquinone oxidoreductase chain 5; Core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that is believed to belong to the minimal assembly required for catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone. (676 aa)
sdh3Succinate dehydrogenase subunit 3. (131 aa)
sdh4Succinate dehydrogenase subunit 4. (86 aa)
rps2Ribosomal protein S2; Belongs to the universal ribosomal protein uS2 family. (241 aa)
rps1Ribosomal protein S1. (243 aa)
atp8ATPase subunit 8. (174 aa)
rps2-230S ribosomal protein S2, chloroplastic. (236 aa)
atpAATP synthase subunit alpha, chloroplastic; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit. Belongs to the ATPase alpha/beta chains family. (507 aa)
rps19-230S ribosomal protein S19, chloroplastic; Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA. (92 aa)
rpl16-250S ribosomal protein L16, chloroplastic; Belongs to the universal ribosomal protein uL16 family. (138 aa)
rps7-230S ribosomal protein S7, chloroplastic; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. (155 aa)
rps14-230S ribosomal protein S14, chloroplastic; Binds 16S rRNA, required for the assembly of 30S particles. (100 aa)
nad7NADH dehydrogenase subunit 7; Belongs to the complex I 49 kDa subunit family. (393 aa)
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
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