Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| atp1 | atp4 | Q1XGA4 | Q1XGD1 | ATP synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane. | ATPase subunit 4. | 0.839 |
| atp1 | atp6 | Q1XGA4 | Q1XGB1 | ATP synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane. | ATP synthase subunit a. | 0.998 |
| atp1 | atp8 | Q1XGA4 | Q1XGD0 | ATP synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane. | ATPase subunit 8. | 0.852 |
| atp1 | atp9 | Q1XGA4 | Q1XG92 | ATP synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane. | ATP synthase subunit 9, mitochondrial; Belongs to the ATPase C chain family. | 0.999 |
| atp1 | ccmB | Q1XGA4 | Q1XGC7 | ATP synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane. | Cytochrome c biogenesis B. | 0.487 |
| atp1 | ccmC | Q1XGA4 | Q1XGC6 | ATP synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane. | Putative cytochrome c biosynthesis ccmC-like mitochondrial protein; May be involved in the export of heme to the mitochondrion for the biogenesis of c-type cytochromes. Belongs to the CcmC/CycZ/HelC family. | 0.653 |
| atp1 | ccmFN | Q1XGA4 | Q1XGC5 | ATP synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane. | Cytochrome c biogenesis factor N. | 0.512 |
| atp1 | cox1 | Q1XGA4 | Q1XGD3 | ATP synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane. | Cytochrome c oxidase subunit 1; Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1-3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B. | 0.895 |
| atp1 | cox2 | Q1XGA4 | Q1XGA9 | ATP synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane. | Cytochrome c oxidase subunit 2; Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1-3 form the functional core of the enzyme complex. Subunit 2 transfers the electrons from cytochrome c via its binuclear copper A center to the bimetallic center of the catalytic subunit 1. | 0.856 |
| atp1 | nad1 | Q1XGA4 | Q1XGA7 | ATP synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane. | NADH-ubiquinone oxidoreductase chain 1; Belongs to the complex I subunit 1 family. | 0.824 |
| atp1 | nad2 | Q1XGA4 | Q1XGB4 | ATP synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane. | NADH dehydrogenase subunit 2. | 0.764 |
| atp1 | nad3 | Q1XGA4 | Q1XGA3 | ATP synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane. | NADH-ubiquinone oxidoreductase chain 3; Core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that is believed to belong to the minimal assembly required for catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone. | 0.805 |
| atp1 | nad4 | Q1XGA4 | Q1XGB5 | ATP synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane. | NADH-ubiquinone oxidoreductase chain 4; Core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that is believed to belong to the minimal assembly required for catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone. | 0.799 |
| atp1 | nad4L | Q1XGA4 | Q1XGC1 | ATP synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane. | NADH dehydrogenase subunit 4L. | 0.705 |
| atp1 | nad5 | Q1XGA4 | Q1XGB7 | ATP synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane. | NADH-ubiquinone oxidoreductase chain 5; Core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that is believed to belong to the minimal assembly required for catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone. | 0.830 |
| atp1 | nad6 | Q1XGA4 | Q1XGB0 | ATP synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane. | NADH-ubiquinone oxidoreductase chain 6; Core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that is believed to belong to the minimal assembly required for catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone. | 0.647 |
| atp1 | nad7 | Q1XGA4 | Q9G6N7 | ATP synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane. | NADH dehydrogenase subunit 7; Belongs to the complex I 49 kDa subunit family. | 0.947 |
| atp1 | nad9 | Q1XGA4 | Q1XGA5 | ATP synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane. | NADH dehydrogenase subunit 9; Belongs to the complex I 30 kDa subunit family. | 0.937 |
| atp1 | rpl16 | Q1XGA4 | Q1XG98 | ATP synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane. | Ribosomal protein L16; Belongs to the universal ribosomal protein uL16 family. | 0.898 |
| atp1 | rpl16-2 | Q1XGA4 | Q6YXK9 | ATP synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane. | 50S ribosomal protein L16, chloroplastic; Belongs to the universal ribosomal protein uL16 family. | 0.924 |
page 1 of 53