8 items (Tetranychus urticae) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	T1K0R6_TETUR	Fe-S_biosyn domain-containing protein. (378 aa)
	T1K5D7_TETUR	Uncharacterized protein. (169 aa)
	T1KF95_TETUR	Aminotran_5 domain-containing protein. (446 aa)
	T1KHU3_TETUR	Uncharacterized protein. (234 aa)
	T1KNA4_TETUR	NifU_N domain-containing protein. (104 aa)
	T1KST8_TETUR	Nfu_N domain-containing protein. (275 aa)
	T1KU16_TETUR	Fe-S_biosyn domain-containing protein. (162 aa)
	T1KU21_TETUR	Uncharacterized protein; Belongs to the complex I LYR family. (101 aa)

Your Current Organism:

Tetranychus urticae

NCBI taxonomy Id: 32264
Other names: T. urticae, red spider mite, two-spotted spider mite, twospotted mite

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
T1K0R6_TETUR	T1K5D7_TETUR	T1K0R6	T1K5D7	Fe-S_biosyn domain-containing protein.	Uncharacterized protein.	0.643
T1K0R6_TETUR	T1KF95_TETUR	T1K0R6	T1KF95	Fe-S_biosyn domain-containing protein.	Aminotran_5 domain-containing protein.	0.844
T1K0R6_TETUR	T1KHU3_TETUR	T1K0R6	T1KHU3	Fe-S_biosyn domain-containing protein.	Uncharacterized protein.	0.798
T1K0R6_TETUR	T1KNA4_TETUR	T1K0R6	T1KNA4	Fe-S_biosyn domain-containing protein.	NifU_N domain-containing protein.	0.958
T1K0R6_TETUR	T1KST8_TETUR	T1K0R6	T1KST8	Fe-S_biosyn domain-containing protein.	Nfu_N domain-containing protein.	0.849
T1K0R6_TETUR	T1KU16_TETUR	T1K0R6	T1KU16	Fe-S_biosyn domain-containing protein.	Fe-S_biosyn domain-containing protein.	0.959
T1K0R6_TETUR	T1KU21_TETUR	T1K0R6	T1KU21	Fe-S_biosyn domain-containing protein.	Uncharacterized protein; Belongs to the complex I LYR family.	0.504
T1K5D7_TETUR	T1K0R6_TETUR	T1K5D7	T1K0R6	Uncharacterized protein.	Fe-S_biosyn domain-containing protein.	0.643
T1K5D7_TETUR	T1KF95_TETUR	T1K5D7	T1KF95	Uncharacterized protein.	Aminotran_5 domain-containing protein.	0.991
T1K5D7_TETUR	T1KHU3_TETUR	T1K5D7	T1KHU3	Uncharacterized protein.	Uncharacterized protein.	0.978
T1K5D7_TETUR	T1KNA4_TETUR	T1K5D7	T1KNA4	Uncharacterized protein.	NifU_N domain-containing protein.	0.996
T1K5D7_TETUR	T1KST8_TETUR	T1K5D7	T1KST8	Uncharacterized protein.	Nfu_N domain-containing protein.	0.764
T1K5D7_TETUR	T1KU16_TETUR	T1K5D7	T1KU16	Uncharacterized protein.	Fe-S_biosyn domain-containing protein.	0.659
T1K5D7_TETUR	T1KU21_TETUR	T1K5D7	T1KU21	Uncharacterized protein.	Uncharacterized protein; Belongs to the complex I LYR family.	0.947
T1KF95_TETUR	T1K0R6_TETUR	T1KF95	T1K0R6	Aminotran_5 domain-containing protein.	Fe-S_biosyn domain-containing protein.	0.844
T1KF95_TETUR	T1K5D7_TETUR	T1KF95	T1K5D7	Aminotran_5 domain-containing protein.	Uncharacterized protein.	0.991
T1KF95_TETUR	T1KNA4_TETUR	T1KF95	T1KNA4	Aminotran_5 domain-containing protein.	NifU_N domain-containing protein.	0.999
T1KF95_TETUR	T1KST8_TETUR	T1KF95	T1KST8	Aminotran_5 domain-containing protein.	Nfu_N domain-containing protein.	0.963
T1KF95_TETUR	T1KU16_TETUR	T1KF95	T1KU16	Aminotran_5 domain-containing protein.	Fe-S_biosyn domain-containing protein.	0.850
T1KF95_TETUR	T1KU21_TETUR	T1KF95	T1KU21	Aminotran_5 domain-containing protein.	Uncharacterized protein; Belongs to the complex I LYR family.	0.969