6 items (Tetranychus urticae) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	T1JQ53_TETUR	Gln-synt_C domain-containing protein; Belongs to the glutamine synthetase family. (352 aa)
	T1K6S5_TETUR	Uncharacterized protein. (243 aa)
	T1KGD6_TETUR	Glutamine amidotransferase type-2 domain-containing protein. (2067 aa)
	T1KHB7_TETUR	2Fe-2S ferredoxin-type domain-containing protein. (162 aa)
	T1KR89_TETUR	2Fe-2S ferredoxin-type domain-containing protein. (158 aa)
	T1KWM9_TETUR	NADPH:adrenodoxin oxidoreductase, mitochondrial. (484 aa)

Your Current Organism:

Tetranychus urticae

NCBI taxonomy Id: 32264
Other names: T. urticae, red spider mite, two-spotted spider mite, twospotted mite

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
T1JQ53_TETUR	T1K6S5_TETUR	T1JQ53	T1K6S5	Gln-synt_C domain-containing protein; Belongs to the glutamine synthetase family.	Uncharacterized protein.	0.795
T1JQ53_TETUR	T1KGD6_TETUR	T1JQ53	T1KGD6	Gln-synt_C domain-containing protein; Belongs to the glutamine synthetase family.	Glutamine amidotransferase type-2 domain-containing protein.	0.912
T1JQ53_TETUR	T1KHB7_TETUR	T1JQ53	T1KHB7	Gln-synt_C domain-containing protein; Belongs to the glutamine synthetase family.	2Fe-2S ferredoxin-type domain-containing protein.	0.690
T1JQ53_TETUR	T1KR89_TETUR	T1JQ53	T1KR89	Gln-synt_C domain-containing protein; Belongs to the glutamine synthetase family.	2Fe-2S ferredoxin-type domain-containing protein.	0.690
T1JQ53_TETUR	T1KWM9_TETUR	T1JQ53	T1KWM9	Gln-synt_C domain-containing protein; Belongs to the glutamine synthetase family.	NADPH:adrenodoxin oxidoreductase, mitochondrial.	0.795
T1K6S5_TETUR	T1JQ53_TETUR	T1K6S5	T1JQ53	Uncharacterized protein.	Gln-synt_C domain-containing protein; Belongs to the glutamine synthetase family.	0.795
T1K6S5_TETUR	T1KGD6_TETUR	T1K6S5	T1KGD6	Uncharacterized protein.	Glutamine amidotransferase type-2 domain-containing protein.	0.997
T1K6S5_TETUR	T1KHB7_TETUR	T1K6S5	T1KHB7	Uncharacterized protein.	2Fe-2S ferredoxin-type domain-containing protein.	0.902
T1K6S5_TETUR	T1KR89_TETUR	T1K6S5	T1KR89	Uncharacterized protein.	2Fe-2S ferredoxin-type domain-containing protein.	0.902
T1KGD6_TETUR	T1JQ53_TETUR	T1KGD6	T1JQ53	Glutamine amidotransferase type-2 domain-containing protein.	Gln-synt_C domain-containing protein; Belongs to the glutamine synthetase family.	0.912
T1KGD6_TETUR	T1K6S5_TETUR	T1KGD6	T1K6S5	Glutamine amidotransferase type-2 domain-containing protein.	Uncharacterized protein.	0.997
T1KGD6_TETUR	T1KHB7_TETUR	T1KGD6	T1KHB7	Glutamine amidotransferase type-2 domain-containing protein.	2Fe-2S ferredoxin-type domain-containing protein.	0.837
T1KGD6_TETUR	T1KR89_TETUR	T1KGD6	T1KR89	Glutamine amidotransferase type-2 domain-containing protein.	2Fe-2S ferredoxin-type domain-containing protein.	0.837
T1KGD6_TETUR	T1KWM9_TETUR	T1KGD6	T1KWM9	Glutamine amidotransferase type-2 domain-containing protein.	NADPH:adrenodoxin oxidoreductase, mitochondrial.	0.997
T1KHB7_TETUR	T1JQ53_TETUR	T1KHB7	T1JQ53	2Fe-2S ferredoxin-type domain-containing protein.	Gln-synt_C domain-containing protein; Belongs to the glutamine synthetase family.	0.690
T1KHB7_TETUR	T1K6S5_TETUR	T1KHB7	T1K6S5	2Fe-2S ferredoxin-type domain-containing protein.	Uncharacterized protein.	0.902
T1KHB7_TETUR	T1KGD6_TETUR	T1KHB7	T1KGD6	2Fe-2S ferredoxin-type domain-containing protein.	Glutamine amidotransferase type-2 domain-containing protein.	0.837
T1KHB7_TETUR	T1KWM9_TETUR	T1KHB7	T1KWM9	2Fe-2S ferredoxin-type domain-containing protein.	NADPH:adrenodoxin oxidoreductase, mitochondrial.	0.902
T1KR89_TETUR	T1JQ53_TETUR	T1KR89	T1JQ53	2Fe-2S ferredoxin-type domain-containing protein.	Gln-synt_C domain-containing protein; Belongs to the glutamine synthetase family.	0.690
T1KR89_TETUR	T1K6S5_TETUR	T1KR89	T1K6S5	2Fe-2S ferredoxin-type domain-containing protein.	Uncharacterized protein.	0.902