STRINGSTRING
nifT nifT nifY nifY ACO76408.1 ACO76408.1 lrv lrv nifE nifE nifN nifN nifX nifX ACO76413.1 ACO76413.1 nifB nifB nifQ nifQ
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
nifTNitrogen fixation protein. (72 aa)
nifYNitrogenase iron molybdenum cofactor biosynthesis protein. (242 aa)
ACO76408.1Conserved hypothetical protein. (89 aa)
lrvNitrogen fixing leucine rich variant repeat 4Fe-4S cluster protein. (244 aa)
nifENitrogenase MoFe cofactor biosynthesis protein NifE; Belongs to the NifD/NifK/NifE/NifN family. (475 aa)
nifNNitrogenase MoFe cofactor biosynthesis protein NifN; Belongs to the NifD/NifK/NifE/NifN family. (458 aa)
nifXNitrogenase MoFe cofactor biosynthesis protein NifX. (158 aa)
ACO76413.1Conserved hypothetical protein. (160 aa)
nifBNitrogenase cofactor biosynthesis protein. (503 aa)
nifQNitrogen fixation cofactor assembly protein. (195 aa)
Your Current Organism:
Azotobacter vinelandii
NCBI taxonomy Id: 322710
Other names: A. vinelandii DJ, Azotobacter vinelandii DJ, Azotobacter vinelandii str. DJ, Azotobacter vinelandii strain DJ
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