STRINGSTRING
cooJ cooJ cooT cooT cooC cooC cooS cooS cooF cooF
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
cooJNickel transporter for carbon monoxide dehydrogenase, HupE/UreJ family. (187 aa)
cooTCarbon monoxide dehydrogenase assessory protein. (73 aa)
cooCCarbon monoxide dehydrogenae assesory protein, CooC. (266 aa)
cooSCarbon-monoxide dehydrogenase, catalytic subunit. (632 aa)
cooFIron-sulfur cluster-binding protein CooF. (185 aa)
Your Current Organism:
Azotobacter vinelandii
NCBI taxonomy Id: 322710
Other names: A. vinelandii DJ, Azotobacter vinelandii DJ, Azotobacter vinelandii str. DJ, Azotobacter vinelandii strain DJ
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