STRINGSTRING
Noc_0030 Noc_0030 Noc_0144 Noc_0144 cpoB cpoB Noc_0277 Noc_0277 Noc_0610 Noc_0610 Noc_0767 Noc_0767 Noc_0942 Noc_0942 Noc_1344 Noc_1344 Noc_1542 Noc_1542 surA surA Noc_2770 Noc_2770 Noc_1768 Noc_1768 flgI flgI Noc_2391 Noc_2391 Noc_2634 Noc_2634
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Noc_0030Peptidase S41A; Belongs to the peptidase S41A family. (439 aa)
Noc_0144Cell division and transport-associated protein TolA; TC 2.C.1.2.1. (318 aa)
cpoBTPR repeat protein; Mediates coordination of peptidoglycan synthesis and outer membrane constriction during cell division; Belongs to the CpoB family. (257 aa)
Noc_0277Possible streptogramin lyase, gluconolactonase family. (326 aa)
Noc_0610Outer membrane transport energization protein TonB; Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy-requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins. Belongs to the TonB family. (217 aa)
Noc_0767PpiC-type peptidyl-prolyl cis-trans isomerase. (304 aa)
Noc_0942Periplasmic protein thiol-disulfide oxidoreductase DsbE. (177 aa)
Noc_1344Extracellular solute-binding protein, family 5. (506 aa)
Noc_1542Multicopper oxidase, type 3. (472 aa)
surAPpiC-type peptidyl-prolyl cis-trans isomerase; Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation. (426 aa)
Noc_2770Extracellular solute-binding protein, family 5. (618 aa)
Noc_1768Extracellular solute-binding protein, family 5. (749 aa)
flgIFlagellar P-ring protein; Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation. (367 aa)
Noc_2391Putative sulfate-binding protein. (320 aa)
Noc_2634Lytic murein transglycosylase B. (329 aa)
Your Current Organism:
Nitrosococcus oceani
NCBI taxonomy Id: 323261
Other names: N. oceani ATCC 19707, Nitrosococcus oceani ATCC 19707, Nitrosococcus oceani C-107, Nitrosococcus oceani NCIMB 11848, Nitrosococcus oceani str. ATCC 19707, Nitrosococcus oceani strain ATCC 19707
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