STRINGSTRING
Noc_2043 Noc_2043 Noc_2005 Noc_2005 Noc_1985 Noc_1985 Noc_1925 Noc_1925 Noc_1820 Noc_1820 lptD lptD Noc_1707 Noc_1707 Noc_1691 Noc_1691 Noc_1625 Noc_1625 Noc_2757 Noc_2757 Noc_1541 Noc_1541 Noc_1537 Noc_1537 Noc_1525 Noc_1525 Noc_1489 Noc_1489 Noc_1484 Noc_1484 Noc_1430 Noc_1430 Noc_1420 Noc_1420 Noc_1275 Noc_1275 Noc_1269 Noc_1269 Noc_1224 Noc_1224 Noc_1197 Noc_1197 bamE bamE nth nth Noc_1152 Noc_1152 Noc_1150 Noc_1150 Noc_1068 Noc_1068 Noc_1065 Noc_1065 Noc_1035 Noc_1035 truA truA Noc_0896 Noc_0896 Noc_0869 Noc_0869 Noc_0859 Noc_0859 bamB bamB bamA bamA glnD glnD Noc_0761 Noc_0761 bamD bamD Noc_0587 Noc_0587 Noc_0541 Noc_0541 Noc_0532 Noc_0532 lolB lolB Noc_0379 Noc_0379 Noc_0370 Noc_0370 pyrR pyrR Noc_0356 Noc_0356 Noc_0321 Noc_0321 Noc_0251 Noc_0251 Noc_0158 Noc_0158 Noc_0150 Noc_0150 Noc_1616 Noc_1616 Noc_2723 Noc_2723 Noc_2695 Noc_2695 lptE lptE Noc_2634 Noc_2634 rlpA rlpA Noc_2601 Noc_2601 Noc_2540 Noc_2540 Noc_2523 Noc_2523 Noc_2485 Noc_2485 Noc_2418 Noc_2418 Noc_2417 Noc_2417 flgH flgH Noc_2284 Noc_2284 Noc_2207 Noc_2207 Noc_2107 Noc_2107 Noc_2978 Noc_2978 Noc_2973 Noc_2973 Noc_2872 Noc_2872 Noc_2788 Noc_2788
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Noc_2043Conserved hypothetical protein. (130 aa)
Noc_2005Protein of unknown function DUF1597. (415 aa)
Noc_1985Polysaccharide export protein. (208 aa)
Noc_1925TonB-dependent receptor. (642 aa)
Noc_1820TonB-dependent receptor. (697 aa)
lptDOrganic solvent tolerance protein; Together with LptE, is involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane. (738 aa)
Noc_1707Protein of unknown function DUF1458. (70 aa)
Noc_1691Protein of unknown function UPF0047. (138 aa)
Noc_1625Lipoprotein, putative. (248 aa)
Noc_2757Fibronectin, type III. (490 aa)
Noc_1541Outer membrane efflux protein. (486 aa)
Noc_1537Outer membrane efflux protein. (445 aa)
Noc_1525Polysaccharide export protein. (243 aa)
Noc_1489TonB-dependent receptor. (689 aa)
Noc_1484Protein of unknown function DUF59. (106 aa)
Noc_1430TonB-dependent receptor. (738 aa)
Noc_1420Outer membrane efflux protein. (472 aa)
Noc_1275RND efflux system, outer membrane lipoprotein, NodT. (590 aa)
Noc_1269TonB-dependent receptor. (710 aa)
Noc_1224Hypothetical protein. (873 aa)
Noc_1197Cyclase/dehydrase. (146 aa)
bamESmpA/OmlA; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane. (196 aa)
nthDNA-(apurinic or apyrimidinic site) lyase; DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N-glycosidic bond, leaving an AP (apurinic/apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'- phosphate. (236 aa)
Noc_1152Protein of unknown function UPF0047. (139 aa)
Noc_1150Conserved hypothetical protein. (402 aa)
Noc_1068Hypothetical protein. (139 aa)
Noc_1065Hypothetical protein. (247 aa)
Noc_1035Protein of unknown function DUF190. (104 aa)
truAPseudouridylate synthase; Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs. (259 aa)
Noc_0896Lytic transglycosylase, catalytic. (190 aa)
Noc_0869Tetrapyrrole methylase family protein / MazG family protein. (180 aa)
Noc_0859TonB-dependent hemoglobin/transferrin/lactoferrin receptor. (676 aa)
bamBPyrrolo-quinoline quinone; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane. (372 aa)
bamAOuter membrane protein; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane. (766 aa)
glnDProtein-P-II uridylyltransferase; Modifies, by uridylylation and deuridylylation, the PII regulatory proteins (GlnB and homologs), in response to the nitrogen status of the cell that GlnD senses through the glutamine level. Under low glutamine levels, catalyzes the conversion of the PII proteins and UTP to PII-UMP and PPi, while under higher glutamine levels, GlnD hydrolyzes PII-UMP to PII and UMP (deuridylylation). Thus, controls uridylylation state and activity of the PII proteins, and plays an important role in the regulation of nitrogen assimilation and metabolism. (892 aa)
Noc_0761General secretion pathway protein D. (833 aa)
bamDProbable transmembrane protein; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane. (261 aa)
Noc_0587Conserved hypothetical protein. (214 aa)
Noc_0541TonB-dependent receptor. (718 aa)
Noc_0532Conserved hypothetical protein. (148 aa)
lolBOuter membrane lipoprotein LolB; Plays a critical role in the incorporation of lipoproteins in the outer membrane after they are released by the LolA protein. (201 aa)
Noc_0379Conserved hypothetical protein. (527 aa)
Noc_0370Outer membrane protein. (588 aa)
pyrRUracil phosphoribosyltransferase; Regulates the transcription of the pyrimidine nucleotide (pyr) operon in response to exogenous pyrimidines. (177 aa)
Noc_0356LppC putative lipoprotein. (629 aa)
Noc_0321Ferrichrome iron receptor. (625 aa)
Noc_0251Fimbrial assembly protein pilQ precursor. (699 aa)
Noc_0158Hypothetical protein. (513 aa)
Noc_0150Outer membrane efflux protein. (415 aa)
Noc_1616Hypothetical protein. (117 aa)
Noc_2723Protein of unknown function DUF330. (211 aa)
Noc_2695Hypothetical protein. (187 aa)
lptERare lipoprotein B; Together with LptD, is involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane. Required for the proper assembly of LptD. Binds LPS and may serve as the LPS recognition site at the outer membrane. (161 aa)
Noc_2634Lytic murein transglycosylase B. (329 aa)
rlpARare lipoprotein A; Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides. (257 aa)
Noc_2601Hypothetical protein. (443 aa)
Noc_2540General secretion pathway protein H; Belongs to the N-Me-Phe pilin family. (147 aa)
Noc_2523NlpB/DapX lipoprotein. (338 aa)
Noc_2485Protein of unknown function DUF59. (183 aa)
Noc_2418Phosphate-selective porin O and P. (469 aa)
Noc_2417Phosphate-selective porin O and P. (464 aa)
flgHFlagellar L-ring protein; Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation. (234 aa)
Noc_2284Protein of unknown function DUF190. (113 aa)
Noc_22072-methylcitrate dehydratase. (483 aa)
Noc_2107NolW-like protein; Belongs to the bacterial secretin family. (287 aa)
Noc_2978Glutamate dehydrogenase (NAD). (1594 aa)
Noc_2973Conserved hypothetical protein. (490 aa)
Noc_2872TonB-dependent receptor. (676 aa)
Noc_2788Sugar phosphate isomerase involved in capsule formation, KpsF/GutQ. (330 aa)
Your Current Organism:
Nitrosococcus oceani
NCBI taxonomy Id: 323261
Other names: N. oceani ATCC 19707, Nitrosococcus oceani ATCC 19707, Nitrosococcus oceani C-107, Nitrosococcus oceani NCIMB 11848, Nitrosococcus oceani str. ATCC 19707, Nitrosococcus oceani strain ATCC 19707
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