STRINGSTRING
Noc_1542 Noc_1542 Noc_2973 Noc_2973 Noc_2872 Noc_2872 Noc_2770 Noc_2770 Noc_2723 Noc_2723 lptE lptE Noc_2634 Noc_2634 rlpA rlpA Noc_2601 Noc_2601 Noc_2540 Noc_2540 Noc_2523 Noc_2523 Noc_2418 Noc_2418 Noc_2417 Noc_2417 Noc_2391 Noc_2391 flgH flgH flgI flgI Noc_2107 Noc_2107 Noc_2043 Noc_2043 Noc_1985 Noc_1985 Noc_1925 Noc_1925 Noc_1820 Noc_1820 Noc_1768 Noc_1768 lptD lptD surA surA Noc_1541 Noc_1541 Noc_1537 Noc_1537 Noc_1525 Noc_1525 Noc_1489 Noc_1489 Noc_1430 Noc_1430 Noc_1420 Noc_1420 Noc_1344 Noc_1344 Noc_1275 Noc_1275 Noc_1269 Noc_1269 Noc_1224 Noc_1224 bamE bamE Noc_1068 Noc_1068 Noc_1065 Noc_1065 Noc_0942 Noc_0942 Noc_0896 Noc_0896 Noc_0859 Noc_0859 bamB bamB bamA bamA Noc_0767 Noc_0767 Noc_0761 Noc_0761 bamD bamD Noc_0610 Noc_0610 Noc_0541 Noc_0541 lolB lolB Noc_0370 Noc_0370 Noc_0356 Noc_0356 Noc_0321 Noc_0321 Noc_0277 Noc_0277 Noc_0251 Noc_0251 Noc_0158 Noc_0158 Noc_0150 Noc_0150 cpoB cpoB Noc_0144 Noc_0144 Noc_0030 Noc_0030
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Noc_1542Multicopper oxidase, type 3. (472 aa)
Noc_2973Conserved hypothetical protein. (490 aa)
Noc_2872TonB-dependent receptor. (676 aa)
Noc_2770Extracellular solute-binding protein, family 5. (618 aa)
Noc_2723Protein of unknown function DUF330. (211 aa)
lptERare lipoprotein B; Together with LptD, is involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane. Required for the proper assembly of LptD. Binds LPS and may serve as the LPS recognition site at the outer membrane. (161 aa)
Noc_2634Lytic murein transglycosylase B. (329 aa)
rlpARare lipoprotein A; Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides. (257 aa)
Noc_2601Hypothetical protein. (443 aa)
Noc_2540General secretion pathway protein H; Belongs to the N-Me-Phe pilin family. (147 aa)
Noc_2523NlpB/DapX lipoprotein. (338 aa)
Noc_2418Phosphate-selective porin O and P. (469 aa)
Noc_2417Phosphate-selective porin O and P. (464 aa)
Noc_2391Putative sulfate-binding protein. (320 aa)
flgHFlagellar L-ring protein; Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation. (234 aa)
flgIFlagellar P-ring protein; Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation. (367 aa)
Noc_2107NolW-like protein; Belongs to the bacterial secretin family. (287 aa)
Noc_2043Conserved hypothetical protein. (130 aa)
Noc_1985Polysaccharide export protein. (208 aa)
Noc_1925TonB-dependent receptor. (642 aa)
Noc_1820TonB-dependent receptor. (697 aa)
Noc_1768Extracellular solute-binding protein, family 5. (749 aa)
lptDOrganic solvent tolerance protein; Together with LptE, is involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane. (738 aa)
surAPpiC-type peptidyl-prolyl cis-trans isomerase; Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation. (426 aa)
Noc_1541Outer membrane efflux protein. (486 aa)
Noc_1537Outer membrane efflux protein. (445 aa)
Noc_1525Polysaccharide export protein. (243 aa)
Noc_1489TonB-dependent receptor. (689 aa)
Noc_1430TonB-dependent receptor. (738 aa)
Noc_1420Outer membrane efflux protein. (472 aa)
Noc_1344Extracellular solute-binding protein, family 5. (506 aa)
Noc_1275RND efflux system, outer membrane lipoprotein, NodT. (590 aa)
Noc_1269TonB-dependent receptor. (710 aa)
Noc_1224Hypothetical protein. (873 aa)
bamESmpA/OmlA; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane. (196 aa)
Noc_1068Hypothetical protein. (139 aa)
Noc_1065Hypothetical protein. (247 aa)
Noc_0942Periplasmic protein thiol-disulfide oxidoreductase DsbE. (177 aa)
Noc_0896Lytic transglycosylase, catalytic. (190 aa)
Noc_0859TonB-dependent hemoglobin/transferrin/lactoferrin receptor. (676 aa)
bamBPyrrolo-quinoline quinone; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane. (372 aa)
bamAOuter membrane protein; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane. (766 aa)
Noc_0767PpiC-type peptidyl-prolyl cis-trans isomerase. (304 aa)
Noc_0761General secretion pathway protein D. (833 aa)
bamDProbable transmembrane protein; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane. (261 aa)
Noc_0610Outer membrane transport energization protein TonB; Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy-requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins. Belongs to the TonB family. (217 aa)
Noc_0541TonB-dependent receptor. (718 aa)
lolBOuter membrane lipoprotein LolB; Plays a critical role in the incorporation of lipoproteins in the outer membrane after they are released by the LolA protein. (201 aa)
Noc_0370Outer membrane protein. (588 aa)
Noc_0356LppC putative lipoprotein. (629 aa)
Noc_0321Ferrichrome iron receptor. (625 aa)
Noc_0277Possible streptogramin lyase, gluconolactonase family. (326 aa)
Noc_0251Fimbrial assembly protein pilQ precursor. (699 aa)
Noc_0158Hypothetical protein. (513 aa)
Noc_0150Outer membrane efflux protein. (415 aa)
cpoBTPR repeat protein; Mediates coordination of peptidoglycan synthesis and outer membrane constriction during cell division; Belongs to the CpoB family. (257 aa)
Noc_0144Cell division and transport-associated protein TolA; TC 2.C.1.2.1. (318 aa)
Noc_0030Peptidase S41A; Belongs to the peptidase S41A family. (439 aa)
Your Current Organism:
Nitrosococcus oceani
NCBI taxonomy Id: 323261
Other names: N. oceani ATCC 19707, Nitrosococcus oceani ATCC 19707, Nitrosococcus oceani C-107, Nitrosococcus oceani NCIMB 11848, Nitrosococcus oceani str. ATCC 19707, Nitrosococcus oceani strain ATCC 19707
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.