STRINGSTRING
Caur_0611 Caur_0611 Caur_0710 Caur_0710 Caur_0711 Caur_0711 Caur_0712 Caur_0712 Caur_0713 Caur_0713 Caur_0731 Caur_0731 Caur_1014 Caur_1014 Caur_1608 Caur_1608 Caur_2051 Caur_2051 Caur_2544 Caur_2544
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Caur_0611KEGG: rrs:RoseRS_0120 TPR repeat-containing protein. (1077 aa)
Caur_0710KEGG: rca:Rcas_1943 membrane protein-like protein. (659 aa)
Caur_0711KEGG: rrs:RoseRS_2657 hypothetical protein. (759 aa)
Caur_0712PFAM: Tetratricopeptide TPR_4; KEGG: rrs:RoseRS_2658 glycosyl transferase, family 39. (712 aa)
Caur_0713PFAM: Tetratricopeptide TPR_4; KEGG: rca:Rcas_2727 glycosyl transferase family 39. (680 aa)
Caur_0731PFAM: peptidase M23B; KEGG: rrs:RoseRS_0052 peptidase M23B. (378 aa)
Caur_1014PFAM: HEAT domain containing protein; PBS lyase HEAT domain protein repeat-containing protein; KEGG: rca:Rcas_1245 PBS lyase heat domain protein repeat-containing protein. (363 aa)
Caur_1608PFAM: PHP domain protein; AAA-4 family protein; SMART: phosphoesterase PHP domain protein; KEGG: rrs:RoseRS_1312 AAA-4 family protein. (770 aa)
Caur_2051KEGG: rrs:RoseRS_2563 hypothetical protein. (811 aa)
Caur_2544KEGG: rca:Rcas_1976 hypothetical protein. (468 aa)
Your Current Organism:
Chloroflexus aurantiacus
NCBI taxonomy Id: 324602
Other names: C. aurantiacus J-10-fl, Chloroflexus aurantiacus ATCC 29366, Chloroflexus aurantiacus DSM 635, Chloroflexus aurantiacus J-10-fl, Chloroflexus aurantiacus str. J-10-fl, Chloroflexus aurantiacus strain J-10-fl
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