STRINGSTRING
Caur_1709 Caur_1709 Caur_1710 Caur_1710 Caur_1773 Caur_1773 Caur_1774 Caur_1774 Caur_2092 Caur_2092 Caur_2093 Caur_2093 Caur_2878 Caur_2878
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Caur_1709PFAM: ABC transporter transmembrane region; ABC transporter related; SMART: AAA ATPase; KEGG: rrs:RoseRS_2719 ABC transporter related. (642 aa)
Caur_1710PFAM: ABC transporter transmembrane region; ABC transporter related; SMART: AAA ATPase; KEGG: rrs:RoseRS_2717 ABC transporter related. (625 aa)
Caur_1773PFAM: ABC transporter transmembrane region; ABC transporter related; SMART: AAA ATPase; KEGG: rrs:RoseRS_2270 ABC transporter related. (605 aa)
Caur_1774PFAM: ABC transporter transmembrane region; ABC transporter related; SMART: AAA ATPase; KEGG: rca:Rcas_3549 ABC transporter related. (605 aa)
Caur_2092PFAM: ABC transporter transmembrane region; ABC transporter related; SMART: AAA ATPase; KEGG: rca:Rcas_1251 cyclic nucleotide-binding protein. (582 aa)
Caur_2093PFAM: ABC transporter transmembrane region; ABC transporter related; SMART: AAA ATPase; KEGG: rrs:RoseRS_0494 ABC transporter related. (594 aa)
Caur_2878PFAM: ABC transporter transmembrane region; ABC transporter related; SMART: AAA ATPase; KEGG: rca:Rcas_3398 ABC transporter related. (619 aa)
Your Current Organism:
Chloroflexus aurantiacus
NCBI taxonomy Id: 324602
Other names: C. aurantiacus J-10-fl, Chloroflexus aurantiacus ATCC 29366, Chloroflexus aurantiacus DSM 635, Chloroflexus aurantiacus J-10-fl, Chloroflexus aurantiacus str. J-10-fl, Chloroflexus aurantiacus strain J-10-fl
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