19 items (Xiphophorus couchianus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ENSXCOP00000001068	Polybromo 1. (1580 aa)
	ENSXCOP00000002094	SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1; Belongs to the SNF5 family. (389 aa)
	ENSXCOP00000007850	Uncharacterized protein. (904 aa)
	Smarca4	Bromo domain-containing protein. (248 aa)
	ENSXCOP00000011941	Helicase ATP-binding domain-containing protein. (226 aa)
	SMARCB1	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1a. (266 aa)
	ENSXCOP00000014183	Uncharacterized protein. (102 aa)
	ENSXCOP00000014192	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1. (299 aa)
	ENSXCOP00000014589	Uncharacterized protein. (129 aa)
	ENSXCOP00000014590	Uncharacterized protein. (1380 aa)
	SMARCE1	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1. (412 aa)
	Phf10	PHD finger protein 10. (403 aa)
	ENSXCOP00000016287	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3b. (430 aa)
	Arid2	AT rich interactive domain 2 (ARID, RFX-like). (1495 aa)
	ENSXCOP00000020425	ARID domain-containing protein. (164 aa)
	smarcd1	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1. (515 aa)
	Smarcc2	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 2. (1013 aa)
	ENSXCOP00000026311	AT rich interactive domain 1B (SWI1-like). (1451 aa)
	ENSXCOP00000027018	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 1b. (460 aa)

Your Current Organism:

Xiphophorus couchianus

NCBI taxonomy Id: 32473
Other names: Limia couchiana, Monterrey platyfish, X. couchianus

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
Arid2	ENSXCOP00000001068	ENSXCOP00000020408	ENSXCOP00000001068	AT rich interactive domain 2 (ARID, RFX-like).	Polybromo 1.	0.966
Arid2	ENSXCOP00000002094	ENSXCOP00000020408	ENSXCOP00000002094	AT rich interactive domain 2 (ARID, RFX-like).	SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1; Belongs to the SNF5 family.	0.841
Arid2	ENSXCOP00000007850	ENSXCOP00000020408	ENSXCOP00000007850	AT rich interactive domain 2 (ARID, RFX-like).	Uncharacterized protein.	0.703
Arid2	ENSXCOP00000011941	ENSXCOP00000020408	ENSXCOP00000011941	AT rich interactive domain 2 (ARID, RFX-like).	Helicase ATP-binding domain-containing protein.	0.688
Arid2	ENSXCOP00000014183	ENSXCOP00000020408	ENSXCOP00000014183	AT rich interactive domain 2 (ARID, RFX-like).	Uncharacterized protein.	0.693
Arid2	ENSXCOP00000014192	ENSXCOP00000020408	ENSXCOP00000014192	AT rich interactive domain 2 (ARID, RFX-like).	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1.	0.693
Arid2	ENSXCOP00000014589	ENSXCOP00000020408	ENSXCOP00000014589	AT rich interactive domain 2 (ARID, RFX-like).	Uncharacterized protein.	0.688
Arid2	ENSXCOP00000014590	ENSXCOP00000020408	ENSXCOP00000014590	AT rich interactive domain 2 (ARID, RFX-like).	Uncharacterized protein.	0.688
Arid2	ENSXCOP00000016287	ENSXCOP00000020408	ENSXCOP00000016287	AT rich interactive domain 2 (ARID, RFX-like).	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3b.	0.705
Arid2	ENSXCOP00000020425	ENSXCOP00000020408	ENSXCOP00000020425	AT rich interactive domain 2 (ARID, RFX-like).	ARID domain-containing protein.	0.898
Arid2	ENSXCOP00000027018	ENSXCOP00000020408	ENSXCOP00000027018	AT rich interactive domain 2 (ARID, RFX-like).	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 1b.	0.703
Arid2	Phf10	ENSXCOP00000020408	ENSXCOP00000016091	AT rich interactive domain 2 (ARID, RFX-like).	PHD finger protein 10.	0.908
Arid2	SMARCB1	ENSXCOP00000020408	ENSXCOP00000013805	AT rich interactive domain 2 (ARID, RFX-like).	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1a.	0.841
Arid2	SMARCE1	ENSXCOP00000020408	ENSXCOP00000015060	AT rich interactive domain 2 (ARID, RFX-like).	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1.	0.693
Arid2	Smarca4	ENSXCOP00000020408	ENSXCOP00000011937	AT rich interactive domain 2 (ARID, RFX-like).	Bromo domain-containing protein.	0.688
Arid2	Smarcc2	ENSXCOP00000020408	ENSXCOP00000026307	AT rich interactive domain 2 (ARID, RFX-like).	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 2.	0.703
Arid2	smarcd1	ENSXCOP00000020408	ENSXCOP00000022159	AT rich interactive domain 2 (ARID, RFX-like).	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1.	0.705
ENSXCOP00000001068	Arid2	ENSXCOP00000001068	ENSXCOP00000020408	Polybromo 1.	AT rich interactive domain 2 (ARID, RFX-like).	0.966
ENSXCOP00000001068	ENSXCOP00000002094	ENSXCOP00000001068	ENSXCOP00000002094	Polybromo 1.	SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1; Belongs to the SNF5 family.	0.967
ENSXCOP00000001068	ENSXCOP00000007850	ENSXCOP00000001068	ENSXCOP00000007850	Polybromo 1.	Uncharacterized protein.	0.950