STRINGSTRING
Ush1c Ush1c Abl1 Abl1 ENSXCOP00000004108 ENSXCOP00000004108 Slc17a8 Slc17a8 Gm2a Gm2a ENSXCOP00000005550 ENSXCOP00000005550 ENSXCOP00000012855 ENSXCOP00000012855 pou4f2 pou4f2 Abl2 Abl2 Cln8 Cln8 Igdcc3 Igdcc3 ENSXCOP00000022693 ENSXCOP00000022693 Fer1l6 Fer1l6 ENSXCOP00000023903 ENSXCOP00000023903 ENSXCOP00000024185 ENSXCOP00000024185 ENSXCOP00000026854 ENSXCOP00000026854 APP APP ENSXCOP00000002324 ENSXCOP00000002324
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Ush1cUsher syndrome 1C. (479 aa)
Abl1Protein kinase domain-containing protein. (223 aa)
ENSXCOP00000004108Otoferlin b. (1627 aa)
Slc17a8Solute carrier family 17 member 8. (548 aa)
Gm2aGM2 ganglioside activator. (199 aa)
ENSXCOP00000005550Otoferlin a. (1878 aa)
ENSXCOP00000012855Uncharacterized protein. (673 aa)
pou4f2POU domain protein. (385 aa)
Abl2Tyrosine-protein kinase. (1177 aa)
Cln8CLN8 transmembrane ER and ERGIC protein. (269 aa)
Igdcc3Immunoglobulin superfamily, DCC subclass, member 3. (614 aa)
ENSXCOP00000022693Beta-hexosaminidase. (534 aa)
Fer1l6Uncharacterized protein. (175 aa)
ENSXCOP00000023903Leucine rich repeat containing 45. (623 aa)
ENSXCOP00000024185SH3 and multiple ankyrin repeat domains 1. (797 aa)
ENSXCOP00000026854Biogenesis of lysosomal organelles complex-1, subunit 4, cappuccino. (208 aa)
APPAmyloid beta precursor protein. (696 aa)
ENSXCOP00000002324POU domain protein. (335 aa)
Your Current Organism:
Xiphophorus couchianus
NCBI taxonomy Id: 32473
Other names: Limia couchiana, Monterrey platyfish, X. couchianus
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