17 items (Xiphophorus couchianus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ENSXCOP00000005241	Uncharacterized protein. (516 aa)
	BCL11A	BAF chromatin remodeling complex subunit BCL11A. (896 aa)
	ENSXCOP00000011071	Im:7142702. (690 aa)
	ENSXCOP00000011385	BRD4 interacting chromatin remodeling complex associated protein. (1279 aa)
	BCL11B	BAF chromatin remodeling complex subunit BCL11B. (809 aa)
	ENSXCOP00000003744	Actin-like 6A; Belongs to the actin family. (397 aa)
	ENSXCOP00000013082	MPN domain containing. (432 aa)
	ENSXCOP00000026457	Bromodomain containing 9. (582 aa)
	smarcd1	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1. (515 aa)
	ENSXCOP00000020425	ARID domain-containing protein. (164 aa)
	Arid2	AT rich interactive domain 2 (ARID, RFX-like). (1495 aa)
	ENSXCOP00000016720	Zinc finger protein 296. (627 aa)
	ENSXCOP00000016386	Uncharacterized protein. (128 aa)
	ENSXCOP00000014183	Uncharacterized protein. (102 aa)
	ENSXCOP00000014192	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1. (299 aa)
	SMARCE1	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1. (412 aa)
	ENSXCOP00000016287	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3b. (430 aa)

Your Current Organism:

Xiphophorus couchianus

NCBI taxonomy Id: 32473
Other names: Limia couchiana, Monterrey platyfish, X. couchianus

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
Arid2	ENSXCOP00000003744	ENSXCOP00000020408	ENSXCOP00000003744	AT rich interactive domain 2 (ARID, RFX-like).	Actin-like 6A; Belongs to the actin family.	0.755
Arid2	ENSXCOP00000014183	ENSXCOP00000020408	ENSXCOP00000014183	AT rich interactive domain 2 (ARID, RFX-like).	Uncharacterized protein.	0.693
Arid2	ENSXCOP00000014192	ENSXCOP00000020408	ENSXCOP00000014192	AT rich interactive domain 2 (ARID, RFX-like).	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1.	0.693
Arid2	ENSXCOP00000016287	ENSXCOP00000020408	ENSXCOP00000016287	AT rich interactive domain 2 (ARID, RFX-like).	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3b.	0.705
Arid2	ENSXCOP00000020425	ENSXCOP00000020408	ENSXCOP00000020425	AT rich interactive domain 2 (ARID, RFX-like).	ARID domain-containing protein.	0.898
Arid2	ENSXCOP00000026457	ENSXCOP00000020408	ENSXCOP00000026457	AT rich interactive domain 2 (ARID, RFX-like).	Bromodomain containing 9.	0.754
Arid2	SMARCE1	ENSXCOP00000020408	ENSXCOP00000015060	AT rich interactive domain 2 (ARID, RFX-like).	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1.	0.693
Arid2	smarcd1	ENSXCOP00000020408	ENSXCOP00000022159	AT rich interactive domain 2 (ARID, RFX-like).	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1.	0.705
ENSXCOP00000003744	Arid2	ENSXCOP00000003744	ENSXCOP00000020408	Actin-like 6A; Belongs to the actin family.	AT rich interactive domain 2 (ARID, RFX-like).	0.755
ENSXCOP00000003744	ENSXCOP00000014183	ENSXCOP00000003744	ENSXCOP00000014183	Actin-like 6A; Belongs to the actin family.	Uncharacterized protein.	0.843
ENSXCOP00000003744	ENSXCOP00000014192	ENSXCOP00000003744	ENSXCOP00000014192	Actin-like 6A; Belongs to the actin family.	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1.	0.843
ENSXCOP00000003744	ENSXCOP00000016287	ENSXCOP00000003744	ENSXCOP00000016287	Actin-like 6A; Belongs to the actin family.	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3b.	0.932
ENSXCOP00000003744	ENSXCOP00000020425	ENSXCOP00000003744	ENSXCOP00000020425	Actin-like 6A; Belongs to the actin family.	ARID domain-containing protein.	0.755
ENSXCOP00000003744	ENSXCOP00000026457	ENSXCOP00000003744	ENSXCOP00000026457	Actin-like 6A; Belongs to the actin family.	Bromodomain containing 9.	0.761
ENSXCOP00000003744	SMARCE1	ENSXCOP00000003744	ENSXCOP00000015060	Actin-like 6A; Belongs to the actin family.	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1.	0.843
ENSXCOP00000003744	smarcd1	ENSXCOP00000003744	ENSXCOP00000022159	Actin-like 6A; Belongs to the actin family.	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1.	0.932
ENSXCOP00000005241	ENSXCOP00000016287	ENSXCOP00000005241	ENSXCOP00000016287	Uncharacterized protein.	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3b.	0.412
ENSXCOP00000005241	ENSXCOP00000026457	ENSXCOP00000005241	ENSXCOP00000026457	Uncharacterized protein.	Bromodomain containing 9.	0.476
ENSXCOP00000005241	smarcd1	ENSXCOP00000005241	ENSXCOP00000022159	Uncharacterized protein.	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1.	0.412
ENSXCOP00000014183	Arid2	ENSXCOP00000014183	ENSXCOP00000020408	Uncharacterized protein.	AT rich interactive domain 2 (ARID, RFX-like).	0.693