20 items (Xiphophorus couchianus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ENSXCOP00000000788	ELM2 and Myb/SANT-like domain containing 1b. (991 aa)
	Mta1	Metastasis associated 1. (519 aa)
	ENSXCOP00000003096	ELM2 and Myb/SANT-like domain containing 1a. (828 aa)
	Mta2	Metastasis associated 1 family, member 2. (643 aa)
	Rere	Arginine-glutamic acid dipeptide (RE) repeats a. (1521 aa)
	ENSXCOP00000006138	REST corepressor 1. (363 aa)
	ENSXCOP00000006429	Arginine-glutamic acid dipeptide (RE) repeats b. (1116 aa)
	ENSXCOP00000006534	REST corepressor 2. (490 aa)
	Mier3	Mesoderm induction early response 1, family member 3 b. (551 aa)
	ENSXCOP00000007352	Transcriptional adaptor 2B. (348 aa)
	ENSXCOP00000007538	Metastasis associated 1 family, member 3. (582 aa)
	ENSXCOP00000007850	Uncharacterized protein. (904 aa)
	Mier1	Mesoderm induction early response 1b, transcriptional regulator. (450 aa)
	ENSXCOP00000011612	Myb-like, SWIRM and MPN domains 1. (737 aa)
	ENSXCOP00000012636	Transcriptional adapter. (418 aa)
	Smarca5	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5. (1008 aa)
	Rcor3	Uncharacterized protein. (460 aa)
	Dnajc2	DnaJ (Hsp40) homolog, subfamily C, member 2. (240 aa)
	ENSXCOP00000020535	Nuclear receptor corepressor 2. (2222 aa)
	Smarcc2	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 2. (1013 aa)

Your Current Organism:

Xiphophorus couchianus

NCBI taxonomy Id: 32473
Other names: Limia couchiana, Monterrey platyfish, X. couchianus

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSXCOP00000006138	ENSXCOP00000007538	ENSXCOP00000006138	ENSXCOP00000007538	REST corepressor 1.	Metastasis associated 1 family, member 3.	0.418
ENSXCOP00000006138	Mta1	ENSXCOP00000006138	ENSXCOP00000001109	REST corepressor 1.	Metastasis associated 1.	0.418
ENSXCOP00000006138	Mta2	ENSXCOP00000006138	ENSXCOP00000004711	REST corepressor 1.	Metastasis associated 1 family, member 2.	0.418
ENSXCOP00000006138	Smarca5	ENSXCOP00000006138	ENSXCOP00000014712	REST corepressor 1.	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5.	0.418
ENSXCOP00000006534	ENSXCOP00000007538	ENSXCOP00000006534	ENSXCOP00000007538	REST corepressor 2.	Metastasis associated 1 family, member 3.	0.418
ENSXCOP00000006534	Mta1	ENSXCOP00000006534	ENSXCOP00000001109	REST corepressor 2.	Metastasis associated 1.	0.418
ENSXCOP00000006534	Mta2	ENSXCOP00000006534	ENSXCOP00000004711	REST corepressor 2.	Metastasis associated 1 family, member 2.	0.418
ENSXCOP00000006534	Smarca5	ENSXCOP00000006534	ENSXCOP00000014712	REST corepressor 2.	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5.	0.418
ENSXCOP00000007352	ENSXCOP00000020535	ENSXCOP00000007352	ENSXCOP00000020535	Transcriptional adaptor 2B.	Nuclear receptor corepressor 2.	0.669
ENSXCOP00000007538	ENSXCOP00000006138	ENSXCOP00000007538	ENSXCOP00000006138	Metastasis associated 1 family, member 3.	REST corepressor 1.	0.418
ENSXCOP00000007538	ENSXCOP00000006534	ENSXCOP00000007538	ENSXCOP00000006534	Metastasis associated 1 family, member 3.	REST corepressor 2.	0.418
ENSXCOP00000007538	Rcor3	ENSXCOP00000007538	ENSXCOP00000014941	Metastasis associated 1 family, member 3.	Uncharacterized protein.	0.418
ENSXCOP00000007538	Smarca5	ENSXCOP00000007538	ENSXCOP00000014712	Metastasis associated 1 family, member 3.	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5.	0.432
ENSXCOP00000007850	Smarca5	ENSXCOP00000007850	ENSXCOP00000014712	Uncharacterized protein.	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5.	0.628
ENSXCOP00000007850	Smarcc2	ENSXCOP00000007850	ENSXCOP00000026307	Uncharacterized protein.	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 2.	0.426
ENSXCOP00000011612	Smarca5	ENSXCOP00000011612	ENSXCOP00000014712	Myb-like, SWIRM and MPN domains 1.	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5.	0.683
ENSXCOP00000012636	ENSXCOP00000020535	ENSXCOP00000012636	ENSXCOP00000020535	Transcriptional adapter.	Nuclear receptor corepressor 2.	0.633
ENSXCOP00000020535	ENSXCOP00000007352	ENSXCOP00000020535	ENSXCOP00000007352	Nuclear receptor corepressor 2.	Transcriptional adaptor 2B.	0.669
ENSXCOP00000020535	ENSXCOP00000012636	ENSXCOP00000020535	ENSXCOP00000012636	Nuclear receptor corepressor 2.	Transcriptional adapter.	0.633
Mta1	ENSXCOP00000006138	ENSXCOP00000001109	ENSXCOP00000006138	Metastasis associated 1.	REST corepressor 1.	0.418