18 items (Xiphophorus couchianus) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

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a 3D structure is known or predicted

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Predicted Interactions

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Your Input:
	ENSXCOP00000016510	DNA polymerase; DNA polymerase that functions in several pathways of DNA repair. Involved in base excision repair (BER) responsible for repair of lesions that give rise to abasic (AP) sites in DNA. Also contributes to DNA double-strand break repair by non-homologous end joining and homologous recombination. Has both template-dependent and template- independent (terminal transferase) DNA polymerase activities. Has also a 5'-deoxyribose-5-phosphate lyase (dRP lyase) activity. (445 aa)
	Lig4	DNA ligase. (908 aa)
	ENSXCOP00000023463	DNA-directed DNA/RNA polymerase mu; Gap-filling polymerase involved in repair of DNA double- strand breaks by non-homologous end joining (NHEJ). Belongs to the DNA polymerase type-X family. (488 aa)
	ENSXCOP00000026249	DBF4 zinc finger. (527 aa)
	Smarcc2	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 2. (1013 aa)
	ENSXCOP00000027018	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 1b. (460 aa)
	ENSXCOP00000022277	BRCT domain-containing protein. (149 aa)
	Bard1	BRCT domain-containing protein. (145 aa)
	ENSXCOP00000018218	BRCT domain-containing protein. (450 aa)
	ENSXCOP00000017945	BRCT domain-containing protein. (378 aa)
	ENSXCOP00000007850	Uncharacterized protein. (904 aa)
	ENSXCOP00000008228	Uncharacterized protein. (1176 aa)
	Dntt	BRCT domain-containing protein; Belongs to the DNA polymerase type-X family. (430 aa)
	Paxip1	BRCT domain-containing protein. (125 aa)
	PES1	Pescadillo homolog; Component of the PeBoW complex, which is required for maturation of 28S and 5.8S ribosomal RNAs and formation of the 60S ribosome. (564 aa)
	ENSXCOP00000010301	X-ray repair complementing defective repair in Chinese hamster cells 1. (533 aa)
	ENSXCOP00000015776	Microcephalin 1. (350 aa)
	Topbp1	DNA topoisomerase II binding protein 1. (1484 aa)

Your Current Organism:

Xiphophorus couchianus

NCBI taxonomy Id: 32473
Other names: Limia couchiana, Monterrey platyfish, X. couchianus

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
Bard1	ENSXCOP00000008228	ENSXCOP00000018472	ENSXCOP00000008228	BRCT domain-containing protein.	Uncharacterized protein.	0.999
Bard1	ENSXCOP00000018218	ENSXCOP00000018472	ENSXCOP00000018218	BRCT domain-containing protein.	BRCT domain-containing protein.	0.596
Bard1	ENSXCOP00000022277	ENSXCOP00000018472	ENSXCOP00000022277	BRCT domain-containing protein.	BRCT domain-containing protein.	0.997
Bard1	Lig4	ENSXCOP00000018472	ENSXCOP00000023299	BRCT domain-containing protein.	DNA ligase.	0.488
Bard1	PES1	ENSXCOP00000018472	ENSXCOP00000022765	BRCT domain-containing protein.	Pescadillo homolog; Component of the PeBoW complex, which is required for maturation of 28S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	0.540
Bard1	Paxip1	ENSXCOP00000018472	ENSXCOP00000009244	BRCT domain-containing protein.	BRCT domain-containing protein.	0.899
Bard1	Topbp1	ENSXCOP00000018472	ENSXCOP00000016390	BRCT domain-containing protein.	DNA topoisomerase II binding protein 1.	0.973
Dntt	ENSXCOP00000008228	ENSXCOP00000008439	ENSXCOP00000008228	BRCT domain-containing protein; Belongs to the DNA polymerase type-X family.	Uncharacterized protein.	0.400
Dntt	ENSXCOP00000010301	ENSXCOP00000008439	ENSXCOP00000010301	BRCT domain-containing protein; Belongs to the DNA polymerase type-X family.	X-ray repair complementing defective repair in Chinese hamster cells 1.	0.822
Dntt	ENSXCOP00000016510	ENSXCOP00000008439	ENSXCOP00000016510	BRCT domain-containing protein; Belongs to the DNA polymerase type-X family.	DNA polymerase; DNA polymerase that functions in several pathways of DNA repair. Involved in base excision repair (BER) responsible for repair of lesions that give rise to abasic (AP) sites in DNA. Also contributes to DNA double-strand break repair by non-homologous end joining and homologous recombination. Has both template-dependent and template- independent (terminal transferase) DNA polymerase activities. Has also a 5'-deoxyribose-5-phosphate lyase (dRP lyase) activity.	0.492
Dntt	Lig4	ENSXCOP00000008439	ENSXCOP00000023299	BRCT domain-containing protein; Belongs to the DNA polymerase type-X family.	DNA ligase.	0.843
ENSXCOP00000007850	Smarcc2	ENSXCOP00000007850	ENSXCOP00000026307	Uncharacterized protein.	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 2.	0.426
ENSXCOP00000008228	Bard1	ENSXCOP00000008228	ENSXCOP00000018472	Uncharacterized protein.	BRCT domain-containing protein.	0.999
ENSXCOP00000008228	Dntt	ENSXCOP00000008228	ENSXCOP00000008439	Uncharacterized protein.	BRCT domain-containing protein; Belongs to the DNA polymerase type-X family.	0.400
ENSXCOP00000008228	ENSXCOP00000010301	ENSXCOP00000008228	ENSXCOP00000010301	Uncharacterized protein.	X-ray repair complementing defective repair in Chinese hamster cells 1.	0.436
ENSXCOP00000008228	ENSXCOP00000018218	ENSXCOP00000008228	ENSXCOP00000018218	Uncharacterized protein.	BRCT domain-containing protein.	0.538
ENSXCOP00000008228	ENSXCOP00000022277	ENSXCOP00000008228	ENSXCOP00000022277	Uncharacterized protein.	BRCT domain-containing protein.	0.877
ENSXCOP00000008228	Lig4	ENSXCOP00000008228	ENSXCOP00000023299	Uncharacterized protein.	DNA ligase.	0.555
ENSXCOP00000008228	Paxip1	ENSXCOP00000008228	ENSXCOP00000009244	Uncharacterized protein.	BRCT domain-containing protein.	0.890
ENSXCOP00000008228	Topbp1	ENSXCOP00000008228	ENSXCOP00000016390	Uncharacterized protein.	DNA topoisomerase II binding protein 1.	0.983