STRINGSTRING
uba52 uba52 FZR1 FZR1 ENSXCOP00000017796 ENSXCOP00000017796 Cul1 Cul1 RGS22 RGS22 FBXO43 FBXO43 LOC114149001 LOC114149001 ENSXCOP00000027383 ENSXCOP00000027383 Cdc20 Cdc20 LOC114138068 LOC114138068 skp1 skp1 ENSXCOP00000009982 ENSXCOP00000009982
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
uba52Ubiquitin A-52 residue ribosomal protein fusion product 1. (128 aa)
FZR1Fizzy/cell division cycle 20 related 1a. (493 aa)
ENSXCOP00000017796F-box protein 5. (353 aa)
Cul1Cullin 1b; Belongs to the cullin family. (332 aa)
RGS22Regulator of G protein signaling 22. (889 aa)
FBXO43F-box protein 43. (635 aa)
LOC114149001Ubiquitin-like domain-containing protein. (77 aa)
ENSXCOP00000027383KxDL motif containing 1. (193 aa)
Cdc20Cell division cycle 20 homolog. (496 aa)
LOC114138068Ribosomal protein S27a. (156 aa)
skp1S-phase kinase-associated protein 1; Belongs to the SKP1 family. (163 aa)
ENSXCOP00000009982Fizzy/cell division cycle 20 related 1b. (483 aa)
Your Current Organism:
Xiphophorus couchianus
NCBI taxonomy Id: 32473
Other names: Limia couchiana, Monterrey platyfish, X. couchianus
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