47 items (Xiphophorus couchianus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ENSXCOP00000020492	Uncharacterized protein. (104 aa)
	ENSXCOP00000000606	YTH domain containing 1. (384 aa)
	ENSXCOP00000000713	Helicase ATP-binding domain-containing protein. (251 aa)
	Dhx9	Uncharacterized protein. (122 aa)
	ENSXCOP00000001031	Inhibitor of nuclear factor kappa B kinase regulatory subunit gamma. (433 aa)
	ENSXCOP00000002136	Inhibitor of nuclear factor kappa B kinase subunit beta. (708 aa)
	trim13	Tripartite motif containing 13. (395 aa)
	ENSXCOP00000002386	Interferon regulatory factor 3. (439 aa)
	LOC114158380	Im:7160594. (477 aa)
	ENSXCOP00000003030	Deltex 4, E3 ubiquitin ligase a. (599 aa)
	Trim32	Tripartite motif containing 32. (680 aa)
	nkiras1	NFKB inhibitor interacting Ras-like 1. (192 aa)
	CHUK	Component of inhibitor of nuclear factor kappa B kinase complex. (733 aa)
	LOC114138068	Ribosomal protein S27a. (156 aa)
	ENSXCOP00000004882	Nuclear factor of kappa light polypeptide gene enhancer in B-cells 2 (p49/p100). (739 aa)
	Lrrfip2	Uncharacterized protein. (102 aa)
	LOC114157395	V-rel avian reticuloendotheliosis viral oncogene homolog A. (628 aa)
	uba52	Ubiquitin A-52 residue ribosomal protein fusion product 1. (128 aa)
	REL	REL proto-oncogene, NF-kB subunit. (624 aa)
	LOC114158792	Nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha a. (301 aa)
	ENSXCOP00000012054	Family with sequence similarity 193 member B. (715 aa)
	Myd88	Myeloid differentiation primary response protein MyD88; Adapter protein involved in the Toll-like receptor and IL-1 receptor signaling pathway in the innate immune response. (306 aa)
	ENSXCOP00000014556	Uncharacterized protein. (105 aa)
	ENSXCOP00000014559	Uncharacterized protein. (826 aa)
	ENSXCOP00000014562	Uncharacterized protein. (140 aa)
	Mfsd1	Major facilitator superfamily domain containing 1. (467 aa)
	Dhx36	DEAH (Asp-Glu-Ala-His) box polypeptide 36. (1021 aa)
	Tbk1	Protein kinase domain-containing protein. (134 aa)
	ENSXCOP00000015859	Component of inhibitor of nuclear factor kappa B kinase complex. (701 aa)
	sting1	Transmembrane protein 173. (398 aa)
	Mre11	Double-strand break repair protein; Involved in DNA double-strand break repair (DSBR). Possesses single-strand endonuclease activity and double-strand-specific 3'-5' exonuclease activity. Also involved in meiotic DSB processing. (664 aa)
	ENSXCOP00000018504	HA2 domain-containing protein. (359 aa)
	ENSXCOP00000018508	Uncharacterized protein. (378 aa)
	Nfkbia	Nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha b. (323 aa)
	ENSXCOP00000018903	E1A binding protein p300 b. (2516 aa)
	ENSXCOP00000019417	CREB binding protein a. (2245 aa)
	Nfkb1	RHD domain-containing protein. (80 aa)
	ENSXCOP00000020012	DEAH (Asp-Glu-Ala-His) box helicase 30. (1000 aa)
	ENSXCOP00000020493	Uncharacterized protein. (940 aa)
	ctnnb1	Catenin (cadherin-associated protein), beta 1. (783 aa)
	YTHDC2	YTH domain containing 2. (1328 aa)
	ENSXCOP00000021977	Signal transducer and activator of transcription. (722 aa)
	ENSXCOP00000022656	STAT_int domain-containing protein. (442 aa)
	nkiras2	NFKB inhibitor interacting Ras-like 2. (192 aa)
	LOC114149001	Ubiquitin-like domain-containing protein. (77 aa)
	ENSXCOP00000027383	KxDL motif containing 1. (193 aa)
	Irf7	Interferon regulatory factor 7. (502 aa)

Your Current Organism:

Xiphophorus couchianus

NCBI taxonomy Id: 32473
Other names: Limia couchiana, Monterrey platyfish, X. couchianus

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CHUK	ENSXCOP00000001031	ENSXCOP00000004485	ENSXCOP00000001031	Component of inhibitor of nuclear factor kappa B kinase complex.	Inhibitor of nuclear factor kappa B kinase regulatory subunit gamma.	0.819
CHUK	ENSXCOP00000002136	ENSXCOP00000004485	ENSXCOP00000002136	Component of inhibitor of nuclear factor kappa B kinase complex.	Inhibitor of nuclear factor kappa B kinase subunit beta.	0.499
CHUK	ENSXCOP00000002386	ENSXCOP00000004485	ENSXCOP00000002386	Component of inhibitor of nuclear factor kappa B kinase complex.	Interferon regulatory factor 3.	0.501
CHUK	ENSXCOP00000004882	ENSXCOP00000004485	ENSXCOP00000004882	Component of inhibitor of nuclear factor kappa B kinase complex.	Nuclear factor of kappa light polypeptide gene enhancer in B-cells 2 (p49/p100).	0.604
CHUK	ENSXCOP00000015859	ENSXCOP00000004485	ENSXCOP00000015859	Component of inhibitor of nuclear factor kappa B kinase complex.	Component of inhibitor of nuclear factor kappa B kinase complex.	0.431
CHUK	ENSXCOP00000021977	ENSXCOP00000004485	ENSXCOP00000021977	Component of inhibitor of nuclear factor kappa B kinase complex.	Signal transducer and activator of transcription.	0.418
CHUK	ENSXCOP00000022656	ENSXCOP00000004485	ENSXCOP00000022656	Component of inhibitor of nuclear factor kappa B kinase complex.	STAT_int domain-containing protein.	0.418
CHUK	Irf7	ENSXCOP00000004485	ENSXCOP00000027602	Component of inhibitor of nuclear factor kappa B kinase complex.	Interferon regulatory factor 7.	0.548
CHUK	LOC114138068	ENSXCOP00000004485	ENSXCOP00000004814	Component of inhibitor of nuclear factor kappa B kinase complex.	Ribosomal protein S27a.	0.579
CHUK	LOC114149001	ENSXCOP00000004485	ENSXCOP00000023106	Component of inhibitor of nuclear factor kappa B kinase complex.	Ubiquitin-like domain-containing protein.	0.532
CHUK	LOC114157395	ENSXCOP00000004485	ENSXCOP00000007384	Component of inhibitor of nuclear factor kappa B kinase complex.	V-rel avian reticuloendotheliosis viral oncogene homolog A.	0.642
CHUK	LOC114158792	ENSXCOP00000004485	ENSXCOP00000011178	Component of inhibitor of nuclear factor kappa B kinase complex.	Nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha a.	0.568
CHUK	Myd88	ENSXCOP00000004485	ENSXCOP00000013380	Component of inhibitor of nuclear factor kappa B kinase complex.	Myeloid differentiation primary response protein MyD88; Adapter protein involved in the Toll-like receptor and IL-1 receptor signaling pathway in the innate immune response.	0.545
CHUK	Nfkb1	ENSXCOP00000004485	ENSXCOP00000019510	Component of inhibitor of nuclear factor kappa B kinase complex.	RHD domain-containing protein.	0.568
CHUK	Nfkbia	ENSXCOP00000004485	ENSXCOP00000018615	Component of inhibitor of nuclear factor kappa B kinase complex.	Nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha b.	0.568
CHUK	REL	ENSXCOP00000004485	ENSXCOP00000008647	Component of inhibitor of nuclear factor kappa B kinase complex.	REL proto-oncogene, NF-kB subunit.	0.642
CHUK	sting1	ENSXCOP00000004485	ENSXCOP00000016645	Component of inhibitor of nuclear factor kappa B kinase complex.	Transmembrane protein 173.	0.813
CHUK	uba52	ENSXCOP00000004485	ENSXCOP00000007438	Component of inhibitor of nuclear factor kappa B kinase complex.	Ubiquitin A-52 residue ribosomal protein fusion product 1.	0.532
Dhx36	Dhx9	ENSXCOP00000015442	ENSXCOP00000000721	DEAH (Asp-Glu-Ala-His) box polypeptide 36.	Uncharacterized protein.	0.435
Dhx36	ENSXCOP00000000713	ENSXCOP00000015442	ENSXCOP00000000713	DEAH (Asp-Glu-Ala-His) box polypeptide 36.	Helicase ATP-binding domain-containing protein.	0.710