STRINGSTRING
LOC114138068 LOC114138068 Bambi Bambi Stub1 Stub1 smad3 smad3 ENSXCOP00000022283 ENSXCOP00000022283 Smad2 Smad2 uba52 uba52 ENSXCOP00000011747 ENSXCOP00000011747 ENSXCOP00000012982 ENSXCOP00000012982 ENSXCOP00000026227 ENSXCOP00000026227 SMAD3 SMAD3 LOC114149001 LOC114149001 Smad7 Smad7 ENSXCOP00000022920 ENSXCOP00000022920 Ldlrad4 Ldlrad4 Strap Strap ENSXCOP00000013255 ENSXCOP00000013255
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
LOC114138068Ribosomal protein S27a. (156 aa)
BambiBMP and activin membrane-bound inhibitor homolog; Negatively regulates TGF-beta signaling. Belongs to the BAMBI family. (260 aa)
Stub1STIP1 homology and U-Box containing protein 1. (287 aa)
smad3Mothers against decapentaplegic homolog. (425 aa)
ENSXCOP00000022283Prostate transmembrane protein, androgen induced 1. (280 aa)
Smad2Mothers against decapentaplegic homolog. (393 aa)
uba52Ubiquitin A-52 residue ribosomal protein fusion product 1. (128 aa)
ENSXCOP00000011747Mothers against decapentaplegic homolog. (437 aa)
ENSXCOP00000012982Transforming growth factor beta; Belongs to the TGF-beta family. (389 aa)
ENSXCOP00000026227Serine/threonine-protein kinase receptor; Belongs to the protein kinase superfamily. TKL Ser/Thr protein kinase family. TGFB receptor subfamily. (547 aa)
SMAD3Mothers against decapentaplegic homolog. (427 aa)
LOC114149001Ubiquitin-like domain-containing protein. (77 aa)
Smad7SMAD family member 7. (180 aa)
ENSXCOP00000022920Serine/threonine-protein kinase receptor; Belongs to the protein kinase superfamily. TKL Ser/Thr protein kinase family. TGFB receptor subfamily. (665 aa)
Ldlrad4Low density lipoprotein receptor class A domain containing 4b. (328 aa)
StrapSerine/threonine kinase receptor associated protein. (198 aa)
ENSXCOP00000013255MH1 domain-containing protein. (71 aa)
Your Current Organism:
Xiphophorus couchianus
NCBI taxonomy Id: 32473
Other names: Limia couchiana, Monterrey platyfish, X. couchianus
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