STRINGSTRING
taf13 taf13 ENSXCOP00000000267 ENSXCOP00000000267 ENSXCOP00000000420 ENSXCOP00000000420 Ccnq Ccnq ELOB ELOB polr2i polr2i Gtf2h3 Gtf2h3 Ercc3 Ercc3 ENSXCOP00000002251 ENSXCOP00000002251 Polr2a Polr2a ENSXCOP00000002330 ENSXCOP00000002330 ENSXCOP00000002443 ENSXCOP00000002443 Polr2g Polr2g ENSXCOP00000002822 ENSXCOP00000002822 ENSXCOP00000003170 ENSXCOP00000003170 ENSXCOP00000003348 ENSXCOP00000003348 Taf10 Taf10 ENSXCOP00000004324 ENSXCOP00000004324 Gtf2h4 Gtf2h4 polr2h polr2h ENSXCOP00000005151 ENSXCOP00000005151 ENSXCOP00000005883 ENSXCOP00000005883 Tbpl1 Tbpl1 Cinp Cinp Supt4h1 Supt4h1 ENSXCOP00000008329 ENSXCOP00000008329 ENSXCOP00000008718 ENSXCOP00000008718 ENSXCOP00000008869 ENSXCOP00000008869 Taf6 Taf6 Gtf2b Gtf2b ENSXCOP00000009910 ENSXCOP00000009910 ENSXCOP00000010519 ENSXCOP00000010519 ENSXCOP00000010709 ENSXCOP00000010709 Taf12 Taf12 ENSXCOP00000011132 ENSXCOP00000011132 Mnat1 Mnat1 nelfb nelfb Mllt1 Mllt1 Nelfa Nelfa POLR2E POLR2E Ercc2 Ercc2 Ell Ell Paf1 Paf1 ENSXCOP00000014026 ENSXCOP00000014026 ncbp2 ncbp2 Taf5l Taf5l TAF4 TAF4 ENSXCOP00000015401 ENSXCOP00000015401 ENSXCOP00000015901 ENSXCOP00000015901 Tbp Tbp Taf5 Taf5 ENSXCOP00000016567 ENSXCOP00000016567 Polr2d Polr2d ENSXCOP00000016807 ENSXCOP00000016807 ENSXCOP00000017161 ENSXCOP00000017161 IWS1 IWS1 ENSXCOP00000017440 ENSXCOP00000017440 Eloa Eloa gtf2e2 gtf2e2 GTF2F2 GTF2F2 Gtf2e1 Gtf2e1 CCNT2 CCNT2 ENSXCOP00000019505 ENSXCOP00000019505 POLR2B POLR2B ENSXCOP00000019962 ENSXCOP00000019962 ENSXCOP00000020058 ENSXCOP00000020058 Gtf2a2 Gtf2a2 CCNK CCNK polr2f polr2f ENSXCOP00000021707 ENSXCOP00000021707 ENSXCOP00000021847 ENSXCOP00000021847 ENSXCOP00000021856 ENSXCOP00000021856 Ccnh Ccnh ENSXCOP00000022541 ENSXCOP00000022541 ENSXCOP00000022771 ENSXCOP00000022771 ENSXCOP00000023265 ENSXCOP00000023265 ENSXCOP00000023376 ENSXCOP00000023376 ENSXCOP00000024151 ENSXCOP00000024151 ENSXCOP00000024552 ENSXCOP00000024552 Leo1 Leo1 ENSXCOP00000024793 ENSXCOP00000024793 Nelfcd Nelfcd Tcea1 Tcea1 Tceanc2 Tceanc2 ENSXCOP00000026128 ENSXCOP00000026128 ENSXCOP00000026396 ENSXCOP00000026396 ENSXCOP00000026818 ENSXCOP00000026818 ENSXCOP00000026847 ENSXCOP00000026847 Tceanc Tceanc polr2c polr2c Taf3 Taf3 Wdr61 Wdr61
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
taf13TATA-box binding protein associated factor 13. (125 aa)
ENSXCOP00000000267Cyclin-dependent kinase 9 (CDC2-related kinase). (379 aa)
ENSXCOP00000000420Solute carrier family 39 member 13. (249 aa)
CcnqCyclin Q; Belongs to the cyclin family. (232 aa)
ELOBElongin B. (126 aa)
polr2iDNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. (126 aa)
Gtf2h3General transcription factor IIH, polypeptide 3. (205 aa)
Ercc3Excision repair cross-complementation group 3. (773 aa)
ENSXCOP00000002251General transcription factor IIF subunit 2; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. This subunit shows ATP-dependent DNA-helicase activity. (252 aa)
Polr2aDNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1788 aa)
ENSXCOP00000002330Uncharacterized protein. (384 aa)
ENSXCOP00000002443General transcription factor IIH, polypeptide 2. (169 aa)
Polr2gPolymerase (RNA) II (DNA directed) polypeptide G-like. (201 aa)
ENSXCOP00000002822FACT complex subunit SSRP1; Component of the FACT complex, a general chromatin factor that acts to reorganize nucleosomes. The FACT complex is involved in multiple processes that require DNA as a template such as mRNA elongation, DNA replication and DNA repair. During transcription elongation the FACT complex acts as a histone chaperone that both destabilizes and restores nucleosomal structure. It facilitates the passage of RNA polymerase II and transcription by promoting the dissociation of one histone H2A-H2B dimer from the nucleosome, then subsequently promotes the reestablishment o [...] (594 aa)
ENSXCOP00000003170Uncharacterized protein. (162 aa)
ENSXCOP00000003348Uncharacterized protein. (155 aa)
Taf10Transcription initiation factor TFIID subunit 10; TFIID is a multimeric protein complex that plays a central role in mediating promoter responses to various activators and repressors; Belongs to the TAF10 family. (136 aa)
ENSXCOP00000004324Uncharacterized protein. (156 aa)
Gtf2h4General transcription factor IIH subunit 4; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family. (447 aa)
polr2hDNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively. (150 aa)
ENSXCOP00000005151RTF1 homolog, Paf1/RNA polymerase II complex component. (668 aa)
ENSXCOP00000005883Uncharacterized protein. (56 aa)
Tbpl1TBP-like 1. (182 aa)
CinpCyclin-dependent kinase 2 interacting protein. (218 aa)
Supt4h1SPT4 homolog, DSIF elongation factor subunit. (94 aa)
ENSXCOP00000008329AF4/FMR2 family, member 4. (676 aa)
ENSXCOP00000008718Transcription initiation factor TFIID subunit. (1822 aa)
ENSXCOP00000008869SPT16 homolog, facilitates chromatin remodeling subunit. (974 aa)
Taf6TAF6 RNA polymerase II, TATA box binding protein (TBP)-associated factor. (652 aa)
Gtf2bGeneral transcription factor IIB. (281 aa)
ENSXCOP00000009910Cell division cycle 73, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae). (512 aa)
ENSXCOP00000010519Cyclin T1; Belongs to the cyclin family. (668 aa)
ENSXCOP00000010709MLLT3 super elongation complex subunit. (384 aa)
Taf12TAF12 RNA polymerase II, TATA box binding protein (TBP)-associated factor. (178 aa)
ENSXCOP00000011132General transcription factor IIA, 1. (363 aa)
Mnat1MNAT1 component of CDK activating kinase. (302 aa)
nelfbNegative elongation factor complex member B. (585 aa)
Mllt1MLLT1 super elongation complex subunit a. (584 aa)
NelfaNegative elongation factor complex member A. (525 aa)
POLR2ERNA polymerase II subunit E. (183 aa)
Ercc2Excision repair cross-complementation group 2. (735 aa)
EllElongation factor RNA polymerase II. (612 aa)
Paf1PAF1 homolog, Paf1/RNA polymerase II complex component. (339 aa)
ENSXCOP00000014026Uncharacterized protein. (151 aa)
ncbp2Nuclear cap-binding protein subunit 2; Component of the cap-binding complex (CBC), which binds co- transcriptionally to the 5' cap of pre-mRNAs and is involved in various processes such as pre-mRNA splicing, translation regulation, nonsense- mediated mRNA decay, RNA-mediated gene silencing (RNAi) by microRNAs (miRNAs) and mRNA export. The CBC complex is involved in mRNA export from the nucleus, leading to the recruitment of the mRNA export machinery to the 5' end of mRNA and to mRNA export in a 5' to 3' direction through the nuclear pore. The CBC complex is also involved in mediating U [...] (164 aa)
Taf5lTAF5-like RNA polymerase II, p300/CBP-associated factor (PCAF)-associated factor. (606 aa)
TAF4TATA-box binding protein associated factor 4. (607 aa)
ENSXCOP00000015401TATA box binding protein like 2. (156 aa)
ENSXCOP00000015901C2 domain-containing protein. (170 aa)
TbpTATA box binding protein. (304 aa)
Taf5TAF5 RNA polymerase II, TATA box binding protein (TBP)-associated factor. (782 aa)
ENSXCOP00000016567annotation not available (78 aa)
Polr2dPolymerase (RNA) II (DNA directed) polypeptide D. (104 aa)
ENSXCOP00000016807TAFH domain-containing protein. (912 aa)
ENSXCOP00000017161TAF11 RNA polymerase II, TATA box binding protein (TBP)-associated factor. (204 aa)
IWS1Interacts with SUPT6H, CTD assembly factor 1. (727 aa)
ENSXCOP00000017440SPT5 homolog, DSIF elongation factor subunit. (342 aa)
EloaElongin A. (182 aa)
gtf2e2Transcription initiation factor IIE subunit beta; Recruits TFIIH to the initiation complex and stimulates the RNA polymerase II C-terminal domain kinase and DNA-dependent ATPase activities of TFIIH. Both TFIIH and TFIIE are required for promoter clearance by RNA polymerase. (287 aa)
GTF2F2General transcription factor IIF, polypeptide 2b. (261 aa)
Gtf2e1General transcription factor IIE, polypeptide 1, alpha. (446 aa)
CCNT2Cyclin T2; Belongs to the cyclin family. (626 aa)
ENSXCOP00000019505Uncharacterized protein. (290 aa)
POLR2BRNA polymerase II subunit B. (366 aa)
ENSXCOP00000019962Uncharacterized protein. (200 aa)
ENSXCOP00000020058General transcription factor IIH, polypeptide 2. (183 aa)
Gtf2a2General transcription factor IIA, 2. (71 aa)
CCNKCyclin K; Belongs to the cyclin family. (244 aa)
polr2fPolymerase (RNA) II (DNA directed) polypeptide F. (127 aa)
ENSXCOP00000021707TAF7 RNA polymerase II, TATA box binding protein (TBP)-associated factor. (335 aa)
ENSXCOP00000021847TAFH domain-containing protein. (843 aa)
ENSXCOP00000021856Transcription elongation factor A (SII), 2. (298 aa)
CcnhCyclin H; Belongs to the cyclin family. (319 aa)
ENSXCOP00000022541Cyclin-dependent kinase 7. (302 aa)
ENSXCOP00000022771TAF2 RNA polymerase II, TATA box binding protein (TBP)-associated factor. (1135 aa)
ENSXCOP00000023265TAFH domain-containing protein. (565 aa)
ENSXCOP00000023376Cyclin T2b; Belongs to the cyclin family. (511 aa)
ENSXCOP00000024151Elongin B. (117 aa)
ENSXCOP00000024552TAF9 RNA polymerase II, TATA box binding protein (TBP)-associated factor. (232 aa)
Leo1LEO1 homolog, Paf1/RNA polymerase II complex component. (617 aa)
ENSXCOP00000024793ELL associated factor 2. (243 aa)
NelfcdNegative elongation factor complex member C/D. (608 aa)
Tcea1Transcription elongation factor A (SII), 1. (321 aa)
Tceanc2Uncharacterized protein. (206 aa)
ENSXCOP00000026128Negative elongation factor complex member E. (330 aa)
ENSXCOP00000026396Si:dkey-12j5.1. (394 aa)
ENSXCOP00000026818General transcription factor IIH, polypeptide 1. (511 aa)
ENSXCOP00000026847Uncharacterized protein. (66 aa)
TceancUncharacterized protein. (340 aa)
polr2cPolymerase (RNA) II (DNA directed) polypeptide C. (275 aa)
Taf3TAF3 RNA polymerase II, TATA box binding protein (TBP)-associated facto. (934 aa)
Wdr61WD repeat domain 61. (306 aa)
Your Current Organism:
Xiphophorus couchianus
NCBI taxonomy Id: 32473
Other names: Limia couchiana, Monterrey platyfish, X. couchianus
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.