STRINGSTRING
polr2f polr2f ENSXCOP00000021615 ENSXCOP00000021615 ENSXCOP00000021856 ENSXCOP00000021856 ENSXCOP00000022149 ENSXCOP00000022149 Ccnh Ccnh ENSXCOP00000022541 ENSXCOP00000022541 ENSXCOP00000023082 ENSXCOP00000023082 LOC114149001 LOC114149001 ZNF830 ZNF830 ENSXCOP00000023626 ENSXCOP00000023626 usp7 usp7 Cops2 Cops2 Tcea1 Tcea1 Tceanc2 Tceanc2 ENSXCOP00000014358 ENSXCOP00000014358 LOC114139024 LOC114139024 ENSXCOP00000016567 ENSXCOP00000016567 ENSXCOP00000016666 ENSXCOP00000016666 Polr2d Polr2d ENSXCOP00000017630 ENSXCOP00000017630 Ddb1 Ddb1 prpf19 prpf19 Gtf2h4 Gtf2h4 polr2h polr2h ENSXCOP00000002552 ENSXCOP00000002552 Polr2g Polr2g Cul4a Cul4a ENSXCOP00000002443 ENSXCOP00000002443 Polr2a Polr2a Ercc3 Ercc3 Gtf2h3 Gtf2h3 polr2i polr2i COPS6 COPS6 ENSXCOP00000018903 ENSXCOP00000018903 LOC114138068 LOC114138068 Ercc8 Ercc8 rbx1 rbx1 uba52 uba52 Mnat1 Mnat1 POLR2E POLR2E Ercc2 Ercc2 Ppp1r42 Ppp1r42 Cops5 Cops5 Ercc6 Ercc6 ENSXCOP00000019505 ENSXCOP00000019505 POLR2B POLR2B polr2c polr2c Tceanc Tceanc ENSXCOP00000027383 ENSXCOP00000027383 ENSXCOP00000026847 ENSXCOP00000026847 ENSXCOP00000026818 ENSXCOP00000026818 cops7a cops7a ENSXCOP00000014026 ENSXCOP00000014026 Xpa Xpa ENSXCOP00000019962 ENSXCOP00000019962 ENSXCOP00000020058 ENSXCOP00000020058
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
polr2fPolymerase (RNA) II (DNA directed) polypeptide F. (127 aa)
ENSXCOP00000021615COP9 signalosome subunit 8. (214 aa)
ENSXCOP00000021856Transcription elongation factor A (SII), 2. (298 aa)
ENSXCOP00000022149Cullin 4B; Belongs to the cullin family. (831 aa)
CcnhCyclin H; Belongs to the cyclin family. (319 aa)
ENSXCOP00000022541Cyclin-dependent kinase 7. (302 aa)
ENSXCOP00000023082ISY1 splicing factor homolog. (115 aa)
LOC114149001Ubiquitin-like domain-containing protein. (77 aa)
ZNF830Zinc finger protein 830. (332 aa)
ENSXCOP00000023626COP9 constitutive photomorphogenic homolog subunit 4 (Arabidopsis). (349 aa)
usp7Ubiquitin specific peptidase 7 (herpes virus-associated); Belongs to the peptidase C19 family. (1104 aa)
Cops2COP9 signalosome subunit 2. (434 aa)
Tcea1Transcription elongation factor A (SII), 1. (321 aa)
Tceanc2Uncharacterized protein. (206 aa)
ENSXCOP00000014358G protein pathway suppressor 1. (459 aa)
LOC114139024High mobility group nucleosome binding domain 6. (97 aa)
ENSXCOP00000016567annotation not available (78 aa)
ENSXCOP00000016666Si:ch73-1a9.3. (73 aa)
Polr2dPolymerase (RNA) II (DNA directed) polypeptide D. (104 aa)
ENSXCOP00000017630NRDE-2, necessary for RNA interference, domain containing. (1032 aa)
Ddb1Damage-specific DNA binding protein 1. (981 aa)
prpf19Pre-mRNA processing factor 19. (505 aa)
Gtf2h4General transcription factor IIH subunit 4; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family. (447 aa)
polr2hDNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively. (150 aa)
ENSXCOP00000002552COP9 signalosome subunit 3. (345 aa)
Polr2gPolymerase (RNA) II (DNA directed) polypeptide G-like. (201 aa)
Cul4aCullin 4A; Belongs to the cullin family. (753 aa)
ENSXCOP00000002443General transcription factor IIH, polypeptide 2. (169 aa)
Polr2aDNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1788 aa)
Ercc3Excision repair cross-complementation group 3. (773 aa)
Gtf2h3General transcription factor IIH, polypeptide 3. (205 aa)
polr2iDNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. (126 aa)
COPS6COP9 signalosome subunit 6. (297 aa)
ENSXCOP00000018903E1A binding protein p300 b. (2516 aa)
LOC114138068Ribosomal protein S27a. (156 aa)
Ercc8Excision repair cross-complementation group 8. (386 aa)
rbx1Ring-box 1, E3 ubiquitin protein ligase. (149 aa)
uba52Ubiquitin A-52 residue ribosomal protein fusion product 1. (128 aa)
Mnat1MNAT1 component of CDK activating kinase. (302 aa)
POLR2ERNA polymerase II subunit E. (183 aa)
Ercc2Excision repair cross-complementation group 2. (735 aa)
Ppp1r42Protein phosphatase 1, regulatory subunit 42. (301 aa)
Cops5COP9 signalosome subunit 5. (336 aa)
Ercc6Excision repair cross-complementation group 6. (1356 aa)
ENSXCOP00000019505Uncharacterized protein. (290 aa)
POLR2BRNA polymerase II subunit B. (366 aa)
polr2cPolymerase (RNA) II (DNA directed) polypeptide C. (275 aa)
TceancUncharacterized protein. (340 aa)
ENSXCOP00000027383KxDL motif containing 1. (193 aa)
ENSXCOP00000026847Uncharacterized protein. (66 aa)
ENSXCOP00000026818General transcription factor IIH, polypeptide 1. (511 aa)
cops7aCOP9 constitutive photomorphogenic homolog subunit 7A. (268 aa)
ENSXCOP00000014026Uncharacterized protein. (151 aa)
XpaXeroderma pigmentosum, complementation group A. (275 aa)
ENSXCOP00000019962Uncharacterized protein. (200 aa)
ENSXCOP00000020058General transcription factor IIH, polypeptide 2. (183 aa)
Your Current Organism:
Xiphophorus couchianus
NCBI taxonomy Id: 32473
Other names: Limia couchiana, Monterrey platyfish, X. couchianus
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