STRINGSTRING
ENSXCOP00000026124 ENSXCOP00000026124 Rprd2 Rprd2 ENSXCOP00000026439 ENSXCOP00000026439 ENSXCOP00000026847 ENSXCOP00000026847 ENSXCOP00000026901 ENSXCOP00000026901 Rprd1a Rprd1a ENSXCOP00000027120 ENSXCOP00000027120 polr2c polr2c ENSXCOP00000028026 ENSXCOP00000028026 ENSXCOP00000016549 ENSXCOP00000016549 Ints4 Ints4 Taf5 Taf5 Pou6f2 Pou6f2 Tbp Tbp ENSXCOP00000015602 ENSXCOP00000015602 ENSXCOP00000015405 ENSXCOP00000015405 ENSXCOP00000015401 ENSXCOP00000015401 ENSXCOP00000015255 ENSXCOP00000015255 Ints12 Ints12 Taf5l Taf5l ncbp2 ncbp2 ENSXCOP00000014026 ENSXCOP00000014026 Pou2f3 Pou2f3 ENSXCOP00000012869 ENSXCOP00000012869 Ell Ell ENSXCOP00000012368 ENSXCOP00000012368 POLR2E POLR2E ENSXCOP00000011200 ENSXCOP00000011200 ENSXCOP00000011132 ENSXCOP00000011132 Srrt Srrt ENSXCOP00000010519 ENSXCOP00000010519 ENSXCOP00000009866 ENSXCOP00000009866 Gtf2b Gtf2b ENSXCOP00000009592 ENSXCOP00000009592 Taf6 Taf6 Supt4h1 Supt4h1 Tbpl1 Tbpl1 ints2 ints2 ENSXCOP00000006234 ENSXCOP00000006234 ENSXCOP00000005322 ENSXCOP00000005322 Tmtc1 Tmtc1 Tmtc3 Tmtc3 polr2h polr2h ENSXCOP00000004324 ENSXCOP00000004324 Rprd1b Rprd1b ENSXCOP00000003898 ENSXCOP00000003898 ints7 ints7 Polr2g Polr2g Polr2a Polr2a ENSXCOP00000002251 ENSXCOP00000002251 ints5 ints5 polr2i polr2i ENSXCOP00000001291 ENSXCOP00000001291 Ccnq Ccnq Pou1f1 Pou1f1 ENSXCOP00000000757 ENSXCOP00000000757 ENSXCOP00000000267 ENSXCOP00000000267 taf13 taf13 ENSXCOP00000016567 ENSXCOP00000016567 Polr2d Polr2d ENSXCOP00000017161 ENSXCOP00000017161 SRRT SRRT Tmtc2 Tmtc2 ENSXCOP00000017440 ENSXCOP00000017440 ENSXCOP00000017900 ENSXCOP00000017900 gtf2e2 gtf2e2 ints13 ints13 ENSXCOP00000018787 ENSXCOP00000018787 ENSXCOP00000018789 ENSXCOP00000018789 GTF2F2 GTF2F2 ENSXCOP00000019113 ENSXCOP00000019113 Gtf2e1 Gtf2e1 CCNT2 CCNT2 ENSXCOP00000019505 ENSXCOP00000019505 POLR2B POLR2B ENSXCOP00000019636 ENSXCOP00000019636 ENSXCOP00000019962 ENSXCOP00000019962 Phax Phax Gtf2a2 Gtf2a2 ENSXCOP00000020528 ENSXCOP00000020528 ENSXCOP00000020670 ENSXCOP00000020670 Taf8 Taf8 CCNK CCNK polr2f polr2f Ints1 Ints1 ENSXCOP00000022541 ENSXCOP00000022541 ENSXCOP00000023376 ENSXCOP00000023376 ENSXCOP00000024309 ENSXCOP00000024309 ENSXCOP00000024552 ENSXCOP00000024552 Pcf11 Pcf11 Ints6 Ints6 ENSXCOP00000024907 ENSXCOP00000024907 ENSXCOP00000025269 ENSXCOP00000025269 ENSXCOP00000025306 ENSXCOP00000025306 Ints8 Ints8 ENSXCOP00000025636 ENSXCOP00000025636 Ints3 Ints3
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
ENSXCOP00000026124Regulation of nuclear pre-mRNA domain containing 2b. (959 aa)
Rprd2CID domain-containing protein. (67 aa)
ENSXCOP00000026439CID domain-containing protein. (429 aa)
ENSXCOP00000026847Uncharacterized protein. (66 aa)
ENSXCOP00000026901Interactor of little elongator complex ELL subunit 2. (886 aa)
Rprd1aRegulation of nuclear pre-mRNA domain containing 1A. (275 aa)
ENSXCOP00000027120ELL domain-containing protein. (114 aa)
polr2cPolymerase (RNA) II (DNA directed) polypeptide C. (275 aa)
ENSXCOP00000028026Zinc finger protein 143b. (561 aa)
ENSXCOP00000016549Uncharacterized protein. (1154 aa)
Ints4Integrator complex subunit 4. (476 aa)
Taf5TAF5 RNA polymerase II, TATA box binding protein (TBP)-associated factor. (782 aa)
Pou6f2POU domain protein. (656 aa)
TbpTATA box binding protein. (304 aa)
ENSXCOP00000015602Integrator complex subunit 6 like. (887 aa)
ENSXCOP00000015405Zinc finger CCCH-type containing 6. (892 aa)
ENSXCOP00000015401TATA box binding protein like 2. (156 aa)
ENSXCOP00000015255Uncharacterized protein. (223 aa)
Ints12Integrator complex subunit 12. (447 aa)
Taf5lTAF5-like RNA polymerase II, p300/CBP-associated factor (PCAF)-associated factor. (606 aa)
ncbp2Nuclear cap-binding protein subunit 2; Component of the cap-binding complex (CBC), which binds co- transcriptionally to the 5' cap of pre-mRNAs and is involved in various processes such as pre-mRNA splicing, translation regulation, nonsense- mediated mRNA decay, RNA-mediated gene silencing (RNAi) by microRNAs (miRNAs) and mRNA export. The CBC complex is involved in mRNA export from the nucleus, leading to the recruitment of the mRNA export machinery to the 5' end of mRNA and to mRNA export in a 5' to 3' direction through the nuclear pore. The CBC complex is also involved in mediating U [...] (164 aa)
ENSXCOP00000014026Uncharacterized protein. (151 aa)
Pou2f3POU class 2 homeobox 3. (419 aa)
ENSXCOP00000012869Elongation factor, RNA polymerase II, 2. (598 aa)
EllElongation factor RNA polymerase II. (612 aa)
ENSXCOP00000012368Integrator complex subunit 14. (460 aa)
POLR2ERNA polymerase II subunit E. (183 aa)
ENSXCOP00000011200Integrator complex subunit 9. (639 aa)
ENSXCOP00000011132General transcription factor IIA, 1. (363 aa)
SrrtDUF3546 domain-containing protein. (211 aa)
ENSXCOP00000010519Cyclin T1; Belongs to the cyclin family. (668 aa)
ENSXCOP00000009866Transmembrane O-mannosyltransferase targeting cadherins 2b. (797 aa)
Gtf2bGeneral transcription factor IIB. (281 aa)
ENSXCOP00000009592RNA polymerase II associated protein 2. (294 aa)
Taf6TAF6 RNA polymerase II, TATA box binding protein (TBP)-associated factor. (652 aa)
Supt4h1SPT4 homolog, DSIF elongation factor subunit. (94 aa)
Tbpl1TBP-like 1. (182 aa)
ints2Integrator complex subunit 2. (1205 aa)
ENSXCOP00000006234Small nuclear RNA activating complex, polypeptide 1b. (241 aa)
ENSXCOP00000005322TPR_REGION domain-containing protein. (51 aa)
Tmtc1Uncharacterized protein. (138 aa)
Tmtc3Transmembrane O-mannosyltransferase targeting cadherins 3. (578 aa)
polr2hDNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively. (150 aa)
ENSXCOP00000004324Uncharacterized protein. (156 aa)
Rprd1bRegulation of nuclear pre-mRNA domain containing 1B. (330 aa)
ENSXCOP00000003898Uncharacterized protein. (259 aa)
ints7Integrator complex subunit 7. (960 aa)
Polr2gPolymerase (RNA) II (DNA directed) polypeptide G-like. (201 aa)
Polr2aDNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1788 aa)
ENSXCOP00000002251General transcription factor IIF subunit 2; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. This subunit shows ATP-dependent DNA-helicase activity. (252 aa)
ints5Integrator complex subunit 5. (1002 aa)
polr2iDNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. (126 aa)
ENSXCOP00000001291ELL domain-containing protein. (70 aa)
CcnqCyclin Q; Belongs to the cyclin family. (232 aa)
Pou1f1POU domain protein. (374 aa)
ENSXCOP00000000757Small nuclear RNA activating complex, polypeptide 5. (106 aa)
ENSXCOP00000000267Cyclin-dependent kinase 9 (CDC2-related kinase). (379 aa)
taf13TATA-box binding protein associated factor 13. (125 aa)
ENSXCOP00000016567annotation not available (78 aa)
Polr2dPolymerase (RNA) II (DNA directed) polypeptide D. (104 aa)
ENSXCOP00000017161TAF11 RNA polymerase II, TATA box binding protein (TBP)-associated factor. (204 aa)
SRRTSerrate, RNA effector molecule. (416 aa)
Tmtc2Transmembrane O-mannosyltransferase targeting cadherins 2a. (632 aa)
ENSXCOP00000017440SPT5 homolog, DSIF elongation factor subunit. (342 aa)
ENSXCOP00000017900POU domain protein. (592 aa)
gtf2e2Transcription initiation factor IIE subunit beta; Recruits TFIIH to the initiation complex and stimulates the RNA polymerase II C-terminal domain kinase and DNA-dependent ATPase activities of TFIIH. Both TFIIH and TFIIE are required for promoter clearance by RNA polymerase. (287 aa)
ints13Integrator complex subunit 13. (701 aa)
ENSXCOP00000018787Uncharacterized protein. (430 aa)
ENSXCOP00000018789ELL domain-containing protein. (108 aa)
GTF2F2General transcription factor IIF, polypeptide 2b. (261 aa)
ENSXCOP00000019113POU domain protein. (579 aa)
Gtf2e1General transcription factor IIE, polypeptide 1, alpha. (446 aa)
CCNT2Cyclin T2; Belongs to the cyclin family. (626 aa)
ENSXCOP00000019505Uncharacterized protein. (290 aa)
POLR2BRNA polymerase II subunit B. (366 aa)
ENSXCOP00000019636Nucleic acid binding protein 1a. (203 aa)
ENSXCOP00000019962Uncharacterized protein. (200 aa)
PhaxPhosphorylated adaptor for RNA export. (413 aa)
Gtf2a2General transcription factor IIA, 2. (71 aa)
ENSXCOP00000020528Integrator complex subunit 11. (560 aa)
ENSXCOP00000020670Uncharacterized protein. (345 aa)
Taf8TAF8 RNA polymerase II, TATA box binding protein (TBP)-associated factor. (243 aa)
CCNKCyclin K; Belongs to the cyclin family. (244 aa)
polr2fPolymerase (RNA) II (DNA directed) polypeptide F. (127 aa)
Ints1Integrator complex subunit 1. (2180 aa)
ENSXCOP00000022541Cyclin-dependent kinase 7. (302 aa)
ENSXCOP00000023376Cyclin T2b; Belongs to the cyclin family. (511 aa)
ENSXCOP00000024309ELL domain-containing protein. (79 aa)
ENSXCOP00000024552TAF9 RNA polymerase II, TATA box binding protein (TBP)-associated factor. (232 aa)
Pcf11CID domain-containing protein. (103 aa)
Ints6Integrator complex subunit 6. (855 aa)
ENSXCOP00000024907Transmembrane O-mannosyltransferase targeting cadherins 4. (715 aa)
ENSXCOP00000025269POU domain protein. (663 aa)
ENSXCOP00000025306Uncharacterized protein. (298 aa)
Ints8Integrator complex subunit 8. (375 aa)
ENSXCOP00000025636POU domain protein. (437 aa)
Ints3Integrator complex subunit 3. (304 aa)
Your Current Organism:
Xiphophorus couchianus
NCBI taxonomy Id: 32473
Other names: Limia couchiana, Monterrey platyfish, X. couchianus
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