STRINGSTRING
polr2c polr2c POLR2B POLR2B ENSXCOP00000019505 ENSXCOP00000019505 GTF2F2 GTF2F2 ENSXCOP00000017440 ENSXCOP00000017440 Polr2d Polr2d ENSXCOP00000016567 ENSXCOP00000016567 ENSXCOP00000014026 ENSXCOP00000014026 ENSXCOP00000013997 ENSXCOP00000013997 Ercc2 Ercc2 POLR2E POLR2E Mnat1 Mnat1 Spag7 Spag7 polr2h polr2h Gtf2h4 Gtf2h4 ENSXCOP00000003170 ENSXCOP00000003170 Polr2g Polr2g ENSXCOP00000026847 ENSXCOP00000026847 ENSXCOP00000026818 ENSXCOP00000026818 ENSXCOP00000025967 ENSXCOP00000025967 ENSXCOP00000022541 ENSXCOP00000022541 Ccnh Ccnh ENSXCOP00000021840 ENSXCOP00000021840 ENSXCOP00000002443 ENSXCOP00000002443 Polr2a Polr2a ENSXCOP00000002251 ENSXCOP00000002251 Ercc3 Ercc3 ENSXCOP00000002137 ENSXCOP00000002137 Gtf2h3 Gtf2h3 polr2i polr2i polr2f polr2f ENSXCOP00000020058 ENSXCOP00000020058 ENSXCOP00000019962 ENSXCOP00000019962
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
polr2cPolymerase (RNA) II (DNA directed) polypeptide C. (275 aa)
POLR2BRNA polymerase II subunit B. (366 aa)
ENSXCOP00000019505Uncharacterized protein. (290 aa)
GTF2F2General transcription factor IIF, polypeptide 2b. (261 aa)
ENSXCOP00000017440SPT5 homolog, DSIF elongation factor subunit. (342 aa)
Polr2dPolymerase (RNA) II (DNA directed) polypeptide D. (104 aa)
ENSXCOP00000016567annotation not available (78 aa)
ENSXCOP00000014026Uncharacterized protein. (151 aa)
ENSXCOP00000013997mRNA cap 0 methyltransferase domain-containing protein. (176 aa)
Ercc2Excision repair cross-complementation group 2. (735 aa)
POLR2ERNA polymerase II subunit E. (183 aa)
Mnat1MNAT1 component of CDK activating kinase. (302 aa)
Spag7Sperm-associated antigen 7 homolog. (229 aa)
polr2hDNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively. (150 aa)
Gtf2h4General transcription factor IIH subunit 4; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family. (447 aa)
ENSXCOP00000003170Uncharacterized protein. (162 aa)
Polr2gPolymerase (RNA) II (DNA directed) polypeptide G-like. (201 aa)
ENSXCOP00000026847Uncharacterized protein. (66 aa)
ENSXCOP00000026818General transcription factor IIH, polypeptide 1. (511 aa)
ENSXCOP00000025967TYR_PHOSPHATASE_2 domain-containing protein. (184 aa)
ENSXCOP00000022541Cyclin-dependent kinase 7. (302 aa)
CcnhCyclin H; Belongs to the cyclin family. (319 aa)
ENSXCOP00000021840Dual specificity phosphatase 11 (RNA/RNP complex 1-interacting). (206 aa)
ENSXCOP00000002443General transcription factor IIH, polypeptide 2. (169 aa)
Polr2aDNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1788 aa)
ENSXCOP00000002251General transcription factor IIF subunit 2; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. This subunit shows ATP-dependent DNA-helicase activity. (252 aa)
Ercc3Excision repair cross-complementation group 3. (773 aa)
ENSXCOP00000002137Polynucleotide 5'-triphosphatase; Bifunctional mRNA-capping enzyme exhibiting RNA 5'- triphosphatase activity in the N-terminal part and mRNA guanylyltransferase activity in the C-terminal part. Catalyzes the first two steps of cap formation: by removing the gamma-phosphate from the 5'-triphosphate end of nascent mRNA to yield a diphosphate end, and by transferring the gmp moiety of GTP to the 5'-diphosphate terminus. (492 aa)
Gtf2h3General transcription factor IIH, polypeptide 3. (205 aa)
polr2iDNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. (126 aa)
polr2fPolymerase (RNA) II (DNA directed) polypeptide F. (127 aa)
ENSXCOP00000020058General transcription factor IIH, polypeptide 2. (183 aa)
ENSXCOP00000019962Uncharacterized protein. (200 aa)
Your Current Organism:
Xiphophorus couchianus
NCBI taxonomy Id: 32473
Other names: Limia couchiana, Monterrey platyfish, X. couchianus
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