STRINGSTRING
ENSXCOP00000009342 ENSXCOP00000009342 twistnb twistnb ENSXCOP00000026847 ENSXCOP00000026847 ENSXCOP00000026818 ENSXCOP00000026818 ENSXCOP00000025779 ENSXCOP00000025779 ENSXCOP00000025430 ENSXCOP00000025430 ENSXCOP00000023682 ENSXCOP00000023682 Ubtf Ubtf ENSXCOP00000022541 ENSXCOP00000022541 Ccnh Ccnh ENSXCOP00000000413 ENSXCOP00000000413 ENSXCOP00000000988 ENSXCOP00000000988 Mta1 Mta1 ENSXCOP00000001143 ENSXCOP00000001143 Gtf2h3 Gtf2h3 Ercc3 Ercc3 ENSXCOP00000002443 ENSXCOP00000002443 ENSXCOP00000002806 ENSXCOP00000002806 ENSXCOP00000004324 ENSXCOP00000004324 Gtf2h4 Gtf2h4 znrd1 znrd1 polr2h polr2h Mta2 Mta2 ENSXCOP00000007538 ENSXCOP00000007538 polr1b polr1b ENSXCOP00000008886 ENSXCOP00000008886 polr2f polr2f ENSXCOP00000020058 ENSXCOP00000020058 ENSXCOP00000018867 ENSXCOP00000018867 Polr1c Polr1c ENSXCOP00000018198 ENSXCOP00000018198 ENSXCOP00000017763 ENSXCOP00000017763 ENSXCOP00000016579 ENSXCOP00000016579 Tbp Tbp ENSXCOP00000015566 ENSXCOP00000015566 ENSXCOP00000015401 ENSXCOP00000015401 ENSXCOP00000014535 ENSXCOP00000014535 Rrn3 Rrn3 Ercc6 Ercc6 Cd3eap Cd3eap ENSXCOP00000012862 ENSXCOP00000012862 Ercc2 Ercc2 ENSXCOP00000012196 ENSXCOP00000012196 POLR2E POLR2E ENSXCOP00000011848 ENSXCOP00000011848 Mnat1 Mnat1 ENSXCOP00000010960 ENSXCOP00000010960
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
ENSXCOP00000009342Uncharacterized protein. (517 aa)
twistnbTWIST neighbor. (357 aa)
ENSXCOP00000026847Uncharacterized protein. (66 aa)
ENSXCOP00000026818General transcription factor IIH, polypeptide 1. (511 aa)
ENSXCOP00000025779Uncharacterized protein. (1773 aa)
ENSXCOP00000025430Uncharacterized protein. (383 aa)
ENSXCOP00000023682Retinoblastoma binding protein 4, like. (382 aa)
UbtfUpstream binding transcription factor. (594 aa)
ENSXCOP00000022541Cyclin-dependent kinase 7. (302 aa)
CcnhCyclin H; Belongs to the cyclin family. (319 aa)
ENSXCOP00000000413Upstream binding transcription factor, like. (658 aa)
ENSXCOP00000000988Chromodomain helicase DNA binding protein 3. (1111 aa)
Mta1Metastasis associated 1. (519 aa)
ENSXCOP00000001143CHDCT2 domain-containing protein. (285 aa)
Gtf2h3General transcription factor IIH, polypeptide 3. (205 aa)
Ercc3Excision repair cross-complementation group 3. (773 aa)
ENSXCOP00000002443General transcription factor IIH, polypeptide 2. (169 aa)
ENSXCOP00000002806Autoimmune regulator. (348 aa)
ENSXCOP00000004324Uncharacterized protein. (156 aa)
Gtf2h4General transcription factor IIH subunit 4; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family. (447 aa)
znrd1DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. (118 aa)
polr2hDNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively. (150 aa)
Mta2Metastasis associated 1 family, member 2. (643 aa)
ENSXCOP00000007538Metastasis associated 1 family, member 3. (582 aa)
polr1bDNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1132 aa)
ENSXCOP00000008886Uncharacterized protein. (689 aa)
polr2fPolymerase (RNA) II (DNA directed) polypeptide F. (127 aa)
ENSXCOP00000020058General transcription factor IIH, polypeptide 2. (183 aa)
ENSXCOP00000018867Chromodomain helicase DNA binding protein 5. (1130 aa)
Polr1cRNA polymerase I and III subunit C. (348 aa)
ENSXCOP00000018198RNA polymerase I subunit E. (402 aa)
ENSXCOP00000017763DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (743 aa)
ENSXCOP00000016579Uncharacterized protein. (522 aa)
TbpTATA box binding protein. (304 aa)
ENSXCOP00000015566Cyclin D binding myb-like transcription factor 1. (559 aa)
ENSXCOP00000015401TATA box binding protein like 2. (156 aa)
ENSXCOP00000014535Retinoblastoma binding protein 4. (452 aa)
Rrn3RRN3 homolog, RNA polymerase I transcription factor. (602 aa)
Ercc6Excision repair cross-complementation group 6. (1356 aa)
Cd3eapCD3e molecule, epsilon associated protein. (297 aa)
ENSXCOP00000012862GATA zinc finger domain containing 2B. (589 aa)
Ercc2Excision repair cross-complementation group 2. (735 aa)
ENSXCOP00000012196GATA zinc finger domain containing 2Ab. (604 aa)
POLR2ERNA polymerase II subunit E. (183 aa)
ENSXCOP00000011848Germ cell nuclear acidic peptidase. (422 aa)
Mnat1MNAT1 component of CDK activating kinase. (302 aa)
ENSXCOP00000010960Uncharacterized protein. (706 aa)
Your Current Organism:
Xiphophorus couchianus
NCBI taxonomy Id: 32473
Other names: Limia couchiana, Monterrey platyfish, X. couchianus
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