STRINGSTRING
ENSXCOP00000000413 ENSXCOP00000000413 Gtf2h3 Gtf2h3 Ercc3 Ercc3 ENSXCOP00000004324 ENSXCOP00000004324 Gtf2h4 Gtf2h4 znrd1 znrd1 polr2h polr2h polr1b polr1b ENSXCOP00000008886 ENSXCOP00000008886 ENSXCOP00000009342 ENSXCOP00000009342 Mnat1 Mnat1 POLR2E POLR2E Ercc2 Ercc2 Cd3eap Cd3eap ENSXCOP00000015401 ENSXCOP00000015401 Tbp Tbp ENSXCOP00000016579 ENSXCOP00000016579 ENSXCOP00000017763 ENSXCOP00000017763 ENSXCOP00000018198 ENSXCOP00000018198 Polr1c Polr1c ENSXCOP00000020058 ENSXCOP00000020058 polr2f polr2f Ccnh Ccnh ENSXCOP00000022430 ENSXCOP00000022430 Cavin1 Cavin1 ENSXCOP00000022541 ENSXCOP00000022541 ENSXCOP00000022646 ENSXCOP00000022646 Ubtf Ubtf ENSXCOP00000026818 ENSXCOP00000026818 ENSXCOP00000026847 ENSXCOP00000026847 twistnb twistnb
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
ENSXCOP00000000413Upstream binding transcription factor, like. (658 aa)
Gtf2h3General transcription factor IIH, polypeptide 3. (205 aa)
Ercc3Excision repair cross-complementation group 3. (773 aa)
ENSXCOP00000004324Uncharacterized protein. (156 aa)
Gtf2h4General transcription factor IIH subunit 4; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family. (447 aa)
znrd1DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. (118 aa)
polr2hDNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively. (150 aa)
polr1bDNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1132 aa)
ENSXCOP00000008886Uncharacterized protein. (689 aa)
ENSXCOP00000009342Uncharacterized protein. (517 aa)
Mnat1MNAT1 component of CDK activating kinase. (302 aa)
POLR2ERNA polymerase II subunit E. (183 aa)
Ercc2Excision repair cross-complementation group 2. (735 aa)
Cd3eapCD3e molecule, epsilon associated protein. (297 aa)
ENSXCOP00000015401TATA box binding protein like 2. (156 aa)
TbpTATA box binding protein. (304 aa)
ENSXCOP00000016579Uncharacterized protein. (522 aa)
ENSXCOP00000017763DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (743 aa)
ENSXCOP00000018198RNA polymerase I subunit E. (402 aa)
Polr1cRNA polymerase I and III subunit C. (348 aa)
ENSXCOP00000020058General transcription factor IIH, polypeptide 2. (183 aa)
polr2fPolymerase (RNA) II (DNA directed) polypeptide F. (127 aa)
CcnhCyclin H; Belongs to the cyclin family. (319 aa)
ENSXCOP00000022430Uncharacterized protein. (162 aa)
Cavin1Uncharacterized protein. (174 aa)
ENSXCOP00000022541Cyclin-dependent kinase 7. (302 aa)
ENSXCOP00000022646Caveolae associated protein 1b. (348 aa)
UbtfUpstream binding transcription factor. (594 aa)
ENSXCOP00000026818General transcription factor IIH, polypeptide 1. (511 aa)
ENSXCOP00000026847Uncharacterized protein. (66 aa)
twistnbTWIST neighbor. (357 aa)
Your Current Organism:
Xiphophorus couchianus
NCBI taxonomy Id: 32473
Other names: Limia couchiana, Monterrey platyfish, X. couchianus
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