STRINGSTRING
ENSXCOP00000021408 ENSXCOP00000021408 GTF3C1 GTF3C1 polr2f polr2f ENSXCOP00000021219 ENSXCOP00000021219 ENSXCOP00000020670 ENSXCOP00000020670 Nfix Nfix ENSXCOP00000019898 ENSXCOP00000019898 Polr1c Polr1c NFIX NFIX ENSXCOP00000016549 ENSXCOP00000016549 Tbp Tbp ENSXCOP00000015401 ENSXCOP00000015401 polr3k polr3k Polr3f Polr3f POLR2E POLR2E ENSXCOP00000012141 ENSXCOP00000012141 ENSXCOP00000011802 ENSXCOP00000011802 Nfia Nfia ENSXCOP00000009664 ENSXCOP00000009664 Crcp Crcp Polr3a Polr3a polr3e polr3e gtf3c4 gtf3c4 Tbpl1 Tbpl1 NFIB NFIB ENSXCOP00000006234 ENSXCOP00000006234 ENSXCOP00000006190 ENSXCOP00000006190 ENSXCOP00000006183 ENSXCOP00000006183 ENSXCOP00000005828 ENSXCOP00000005828 polr2h polr2h ENSXCOP00000004324 ENSXCOP00000004324 ENSXCOP00000001374 ENSXCOP00000001374 ENSXCOP00000000914 ENSXCOP00000000914 ENSXCOP00000000757 ENSXCOP00000000757 ENSXCOP00000000644 ENSXCOP00000000644 ENSXCOP00000028026 ENSXCOP00000028026 ENSXCOP00000027817 ENSXCOP00000027817 ENSXCOP00000027623 ENSXCOP00000027623 Polr3b Polr3b gtf3c6 gtf3c6 ENSXCOP00000026847 ENSXCOP00000026847 ENSXCOP00000026140 ENSXCOP00000026140 Ssb Ssb ENSXCOP00000025269 ENSXCOP00000025269 ENSXCOP00000022662 ENSXCOP00000022662 Polr3g Polr3g ENSXCOP00000022054 ENSXCOP00000022054
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
ENSXCOP00000021408Polymerase (RNA) III (DNA directed) polypeptide H. (190 aa)
GTF3C1General transcription factor IIIC subunit 1. (1330 aa)
polr2fPolymerase (RNA) II (DNA directed) polypeptide F. (127 aa)
ENSXCOP00000021219Polymerase (RNA) III (DNA directed) polypeptide D. (367 aa)
ENSXCOP00000020670Uncharacterized protein. (345 aa)
NfixUncharacterized protein. (150 aa)
ENSXCOP00000019898General transcription factor IIIAa. (348 aa)
Polr1cRNA polymerase I and III subunit C. (348 aa)
NFIXNuclear factor 1; Recognizes and binds the palindromic sequence 5'- TTGGCNNNNNGCCAA-3' present in viral and cellular promoters and in the origin of replication of adenovirus type 2. These proteins are individually capable of activating transcription and replication. (436 aa)
ENSXCOP00000016549Uncharacterized protein. (1154 aa)
TbpTATA box binding protein. (304 aa)
ENSXCOP00000015401TATA box binding protein like 2. (156 aa)
polr3kDNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. (108 aa)
Polr3fDNA-directed RNA polymerase III subunit RPC6; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Specific peripheric component of RNA polymerase III which synthesizes small RNAs, such as 5S rRNA and tRNAs; Belongs to the eukaryotic RPC34/RPC39 RNA polymerase subunit family. (275 aa)
POLR2ERNA polymerase II subunit E. (183 aa)
ENSXCOP00000012141General transcription factor IIIC, polypeptide 5. (502 aa)
ENSXCOP00000011802CTF/NF-I domain-containing protein. (98 aa)
NfiaCTF/NF-I domain-containing protein. (254 aa)
ENSXCOP00000009664Nuclear factor I/A. (177 aa)
CrcpCalcitonin gene-related peptide-receptor component protein. (157 aa)
Polr3aDNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (651 aa)
polr3ePolymerase (RNA) III (DNA directed) polypeptide E. (686 aa)
gtf3c4General transcription factor IIIC, polypeptide 4. (771 aa)
Tbpl1TBP-like 1. (182 aa)
NFIBNuclear factor 1; Recognizes and binds the palindromic sequence 5'- TTGGCNNNNNGCCAA-3' present in viral and cellular promoters and in the origin of replication of adenovirus type 2. These proteins are individually capable of activating transcription and replication. (488 aa)
ENSXCOP00000006234Small nuclear RNA activating complex, polypeptide 1b. (241 aa)
ENSXCOP00000006190TFIIB domain-containing protein. (116 aa)
ENSXCOP00000006183TFIIB-type domain-containing protein. (171 aa)
ENSXCOP00000005828BRF2 RNA polymerase III transcription initiation factor subunit. (399 aa)
polr2hDNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively. (150 aa)
ENSXCOP00000004324Uncharacterized protein. (156 aa)
ENSXCOP00000001374SANT domain-containing protein. (435 aa)
ENSXCOP00000000914BRF1 RNA polymerase III transcription initiation factor subunit b. (734 aa)
ENSXCOP00000000757Small nuclear RNA activating complex, polypeptide 5. (106 aa)
ENSXCOP00000000644CTF/NF-I domain-containing protein. (92 aa)
ENSXCOP00000028026Zinc finger protein 143b. (561 aa)
ENSXCOP00000027817Uncharacterized protein. (181 aa)
ENSXCOP00000027623General transcription factor IIIC, polypeptide 3. (834 aa)
Polr3bDNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1092 aa)
gtf3c6TFIIIC_sub6 domain-containing protein. (154 aa)
ENSXCOP00000026847Uncharacterized protein. (66 aa)
ENSXCOP00000026140RNA polymerase III subunit C3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (509 aa)
SsbSmall RNA binding exonuclease protection factor La. (376 aa)
ENSXCOP00000025269POU domain protein. (663 aa)
ENSXCOP00000022662Uncharacterized protein. (149 aa)
Polr3gUncharacterized protein. (90 aa)
ENSXCOP00000022054Si:dkey-208k4.2. (346 aa)
Your Current Organism:
Xiphophorus couchianus
NCBI taxonomy Id: 32473
Other names: Limia couchiana, Monterrey platyfish, X. couchianus
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