38 items (Xiphophorus couchianus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ENSXCOP00000027752	Homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1. (382 aa)
	sumo2	Small ubiquitin-related modifier. (95 aa)
	tmub1	Transmembrane and ubiquitin-like domain containing 1. (238 aa)
	LOC114156812	Ubiquitin-like domain-containing protein. (83 aa)
	Ubl7	Ubiquitin-like 7b (bone marrow stromal cell-derived). (376 aa)
	ENSXCOP00000000851	Ubiquitin-like domain-containing protein. (92 aa)
	ENSXCOP00000000855	Ubiquitin-like domain-containing protein. (119 aa)
	sumo1	Small ubiquitin-related modifier. (101 aa)
	ELOB	Elongin B. (126 aa)
	Ubtd1	Ubiquitin domain containing 1b. (245 aa)
	RAD23B	RAD23 homolog B, nucleotide excision repair protein. (372 aa)
	UHRF2	Ubiquitin like with PHD and ring finger domains 2. (770 aa)
	Uhrf1	Ubiquitin-like with PHD and ring finger domains 1. (775 aa)
	LOC114138068	Ribosomal protein S27a. (156 aa)
	Bag6	Ubiquitin-like domain-containing protein. (160 aa)
	ENSXCOP00000007417	Uncharacterized protein. (143 aa)
	uba52	Ubiquitin A-52 residue ribosomal protein fusion product 1. (128 aa)
	ENSXCOP00000009038	Ubiquitin-like domain containing CTD phosphatase 1. (279 aa)
	ENSXCOP00000009048	Ubiquitin-like domain-containing protein. (92 aa)
	NEDD8	NEDD8 ubiquitin like modifier. (79 aa)
	ENSXCOP00000012238	Midnolin. (438 aa)
	ubac1	UBA domain containing 1. (420 aa)
	ENSXCOP00000016015	Ubiquitin-like domain-containing protein. (233 aa)
	LOC114145030	Small ubiquitin-related modifier. (96 aa)
	ENSXCOP00000017799	DNA-damage inducible protein 2. (416 aa)
	LOC114134311	Small ubiquitin-related modifier. (94 aa)
	ENSXCOP00000020582	RAD23 homolog A, nucleotide excision repair protein a. (359 aa)
	sf3a1	Splicing factor 3a, subunit 1. (784 aa)
	LOC114155137	Ubiquitin like 4A. (156 aa)
	bag1	BCL2 associated athanogene 1. (207 aa)
	Ubfd1	Ubiquitin family domain containing 1. (278 aa)
	LOC114154998	Uncharacterized protein. (155 aa)
	LOC114154999	Uncharacterized protein. (155 aa)
	LOC114149001	Ubiquitin-like domain-containing protein. (77 aa)
	ENSXCOP00000023416	Transmembrane and ubiquitin-like domain containing 2. (314 aa)
	ENSXCOP00000024151	Elongin B. (117 aa)
	ENSXCOP00000026320	Ubiquitin-like domain-containing protein. (365 aa)
	ENSXCOP00000026949	Ubiquilin 4. (548 aa)

Your Current Organism:

Xiphophorus couchianus

NCBI taxonomy Id: 32473
Other names: Limia couchiana, Monterrey platyfish, X. couchianus

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
Bag6	ENSXCOP00000000851	ENSXCOP00000004959	ENSXCOP00000000851	Ubiquitin-like domain-containing protein.	Ubiquitin-like domain-containing protein.	0.532
Bag6	ENSXCOP00000000855	ENSXCOP00000004959	ENSXCOP00000000855	Ubiquitin-like domain-containing protein.	Ubiquitin-like domain-containing protein.	0.532
Bag6	ENSXCOP00000007417	ENSXCOP00000004959	ENSXCOP00000007417	Ubiquitin-like domain-containing protein.	Uncharacterized protein.	0.532
Bag6	ENSXCOP00000009048	ENSXCOP00000004959	ENSXCOP00000009048	Ubiquitin-like domain-containing protein.	Ubiquitin-like domain-containing protein.	0.532
Bag6	ENSXCOP00000020582	ENSXCOP00000004959	ENSXCOP00000020582	Ubiquitin-like domain-containing protein.	RAD23 homolog A, nucleotide excision repair protein a.	0.435
Bag6	ENSXCOP00000026949	ENSXCOP00000004959	ENSXCOP00000026949	Ubiquitin-like domain-containing protein.	Ubiquilin 4.	0.548
Bag6	LOC114138068	ENSXCOP00000004959	ENSXCOP00000004814	Ubiquitin-like domain-containing protein.	Ribosomal protein S27a.	0.419
Bag6	LOC114154998	ENSXCOP00000004959	ENSXCOP00000022875	Ubiquitin-like domain-containing protein.	Uncharacterized protein.	0.532
Bag6	LOC114154999	ENSXCOP00000004959	ENSXCOP00000022882	Ubiquitin-like domain-containing protein.	Uncharacterized protein.	0.532
Bag6	LOC114155137	ENSXCOP00000004959	ENSXCOP00000021327	Ubiquitin-like domain-containing protein.	Ubiquitin like 4A.	0.958
Bag6	LOC114156812	ENSXCOP00000004959	ENSXCOP00000000375	Ubiquitin-like domain-containing protein.	Ubiquitin-like domain-containing protein.	0.419
Bag6	NEDD8	ENSXCOP00000004959	ENSXCOP00000010341	Ubiquitin-like domain-containing protein.	NEDD8 ubiquitin like modifier.	0.419
Bag6	RAD23B	ENSXCOP00000004959	ENSXCOP00000003258	Ubiquitin-like domain-containing protein.	RAD23 homolog B, nucleotide excision repair protein.	0.435
Bag6	Ubl7	ENSXCOP00000004959	ENSXCOP00000000651	Ubiquitin-like domain-containing protein.	Ubiquitin-like 7b (bone marrow stromal cell-derived).	0.625
ELOB	ENSXCOP00000000851	ENSXCOP00000001255	ENSXCOP00000000851	Elongin B.	Ubiquitin-like domain-containing protein.	0.490
ELOB	ENSXCOP00000000855	ENSXCOP00000001255	ENSXCOP00000000855	Elongin B.	Ubiquitin-like domain-containing protein.	0.490
ELOB	ENSXCOP00000007417	ENSXCOP00000001255	ENSXCOP00000007417	Elongin B.	Uncharacterized protein.	0.490
ELOB	ENSXCOP00000009048	ENSXCOP00000001255	ENSXCOP00000009048	Elongin B.	Ubiquitin-like domain-containing protein.	0.490
ELOB	ENSXCOP00000020582	ENSXCOP00000001255	ENSXCOP00000020582	Elongin B.	RAD23 homolog A, nucleotide excision repair protein a.	0.427
ELOB	ENSXCOP00000024151	ENSXCOP00000001255	ENSXCOP00000024151	Elongin B.	Elongin B.	0.901