(25 nodes) Mixed, incl. Activation of C3 and C5, and Complement receptor activity network (Neolamprologus brichardi)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ENSNBRP00000000733	Anaphylatoxin-like domain-containing protein. (1317 aa)
	ENSNBRP00000000771	G_PROTEIN_RECEP_F1_2 domain-containing protein. (442 aa)
	ENSNBRP00000001058	Uncharacterized protein. (1626 aa)
	LOC102785809	Si:ch1073-280e3.1; Belongs to the peptidase S1 family. (780 aa)
	ENSNBRP00000008277	Formyl peptide receptor 1; Belongs to the G-protein coupled receptor 1 family. (381 aa)
	LOC102790686	Uncharacterized protein; Belongs to the peptidase S1 family. (754 aa)
	ENSNBRP00000011185	CUB domain-containing protein. (228 aa)
	LOC102798219	Serpin peptidase inhibitor, clade G (C1 inhibitor), member 1; Belongs to the serpin family. (595 aa)
	LOC102790901	C1q domain-containing protein. (241 aa)
	LOC102790621	C1q domain-containing protein. (246 aa)
	ENSNBRP00000022106	G_PROTEIN_RECEP_F1_2 domain-containing protein. (169 aa)
	ENSNBRP00000022133	G_PROTEIN_RECEP_F1_2 domain-containing protein. (297 aa)
	LOC102792896	Complement 4B (Chido blood group). (1660 aa)
	LOC102776805	Complement 4B (Chido blood group). (1654 aa)
	ENSNBRP00000023809	C-type lectin domain-containing protein. (146 aa)
	LOC102793114	Uncharacterized protein. (370 aa)
	COLEC10	Collectin subfamily member 10. (203 aa)
	ENSNBRP00000028540	Uncharacterized protein; Belongs to the peptidase S1 family. (697 aa)
	ENSNBRP00000028588	Complement component 1, r subcomponent; Belongs to the peptidase S1 family. (701 aa)
	ENSNBRP00000028632	Uncharacterized protein. (287 aa)
	LOC102799388	Peptidase S1 domain-containing protein; Belongs to the peptidase S1 family. (275 aa)
	LOC102799027	Uncharacterized protein. (348 aa)
	ENSNBRP00000031846	C345C domain-containing protein. (147 aa)
	LOC102794499	Uncharacterized protein; Belongs to the peptidase S1 family. (551 aa)
	LOC102800051	Complement component c3b, tandem duplicate 2. (1563 aa)

Your Current Organism:

Neolamprologus brichardi

NCBI taxonomy Id: 32507
Other names: Lamprologus brichardi, N. brichardi, lyretail cichlid

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
COLEC10	ENSNBRP00000000733	ENSNBRP00000026025	ENSNBRP00000000733	Collectin subfamily member 10.	Anaphylatoxin-like domain-containing protein.	0.416
COLEC10	ENSNBRP00000001058	ENSNBRP00000026025	ENSNBRP00000001058	Collectin subfamily member 10.	Uncharacterized protein.	0.416
COLEC10	ENSNBRP00000011185	ENSNBRP00000026025	ENSNBRP00000011185	Collectin subfamily member 10.	CUB domain-containing protein.	0.751
COLEC10	ENSNBRP00000023809	ENSNBRP00000026025	ENSNBRP00000023809	Collectin subfamily member 10.	C-type lectin domain-containing protein.	0.707
COLEC10	ENSNBRP00000028540	ENSNBRP00000026025	ENSNBRP00000028540	Collectin subfamily member 10.	Uncharacterized protein; Belongs to the peptidase S1 family.	0.751
COLEC10	ENSNBRP00000028588	ENSNBRP00000026025	ENSNBRP00000028588	Collectin subfamily member 10.	Complement component 1, r subcomponent; Belongs to the peptidase S1 family.	0.751
COLEC10	ENSNBRP00000028632	ENSNBRP00000026025	ENSNBRP00000028632	Collectin subfamily member 10.	Uncharacterized protein.	0.751
COLEC10	ENSNBRP00000031846	ENSNBRP00000026025	ENSNBRP00000031846	Collectin subfamily member 10.	C345C domain-containing protein.	0.416
COLEC10	LOC102776805	ENSNBRP00000026025	ENSNBRP00000023277	Collectin subfamily member 10.	Complement 4B (Chido blood group).	0.411
COLEC10	LOC102785809	ENSNBRP00000026025	ENSNBRP00000001594	Collectin subfamily member 10.	Si:ch1073-280e3.1; Belongs to the peptidase S1 family.	0.444
COLEC10	LOC102790686	ENSNBRP00000026025	ENSNBRP00000009097	Collectin subfamily member 10.	Uncharacterized protein; Belongs to the peptidase S1 family.	0.452
COLEC10	LOC102790901	ENSNBRP00000026025	ENSNBRP00000019437	Collectin subfamily member 10.	C1q domain-containing protein.	0.577
COLEC10	LOC102792896	ENSNBRP00000026025	ENSNBRP00000023099	Collectin subfamily member 10.	Complement 4B (Chido blood group).	0.411
COLEC10	LOC102798219	ENSNBRP00000026025	ENSNBRP00000019364	Collectin subfamily member 10.	Serpin peptidase inhibitor, clade G (C1 inhibitor), member 1; Belongs to the serpin family.	0.463
COLEC10	LOC102799027	ENSNBRP00000026025	ENSNBRP00000031844	Collectin subfamily member 10.	Uncharacterized protein.	0.416
COLEC10	LOC102800051	ENSNBRP00000026025	ENSNBRP00000032093	Collectin subfamily member 10.	Complement component c3b, tandem duplicate 2.	0.411
ENSNBRP00000000733	COLEC10	ENSNBRP00000000733	ENSNBRP00000026025	Anaphylatoxin-like domain-containing protein.	Collectin subfamily member 10.	0.416
ENSNBRP00000000733	ENSNBRP00000000771	ENSNBRP00000000733	ENSNBRP00000000771	Anaphylatoxin-like domain-containing protein.	G_PROTEIN_RECEP_F1_2 domain-containing protein.	0.691
ENSNBRP00000000733	ENSNBRP00000008277	ENSNBRP00000000733	ENSNBRP00000008277	Anaphylatoxin-like domain-containing protein.	Formyl peptide receptor 1; Belongs to the G-protein coupled receptor 1 family.	0.452
ENSNBRP00000000733	ENSNBRP00000011185	ENSNBRP00000000733	ENSNBRP00000011185	Anaphylatoxin-like domain-containing protein.	CUB domain-containing protein.	0.741