STRINGSTRING
LOC102777348 LOC102777348 ENSNBRP00000004179 ENSNBRP00000004179 LOC102791696 LOC102791696 LOC102780233 LOC102780233 LOC102786804 LOC102786804 LOC102798988 LOC102798988 LOC102795343 LOC102795343 LOC102785573 LOC102785573 ENSNBRP00000024395 ENSNBRP00000024395 LOC102798684 LOC102798684 LOC102788123 LOC102788123 LOC102783470 LOC102783470 LOC102787073 LOC102787073
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
LOC102777348Ubiquitin-like domain-containing protein. (126 aa)
ENSNBRP00000004179UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family. (163 aa)
LOC102791696Ubiquitin-conjugating enzyme E2Nb; Belongs to the ubiquitin-conjugating enzyme family. (154 aa)
LOC102780233Ubiquitin-conjugating enzyme E2 variant 1. (151 aa)
LOC102786804Ubiquitin conjugating enzyme E2 K; Belongs to the ubiquitin-conjugating enzyme family. (200 aa)
LOC102798988Ribosomal protein S27a. (156 aa)
LOC102795343Ubiquitin-conjugating enzyme E2 variant 2. (145 aa)
LOC102785573Ubiquitin-conjugating enzyme E2Kb (UBC1 homolog, yeast); Belongs to the ubiquitin-conjugating enzyme family. (200 aa)
ENSNBRP00000024395UBIQUITIN_CONJUGAT_2 domain-containing protein. (151 aa)
LOC102798684Zinc finger, AN1-type domain 4. (687 aa)
LOC102788123Baculoviral IAP repeat containing 6. (4745 aa)
LOC102783470Ubiquitin-like domain-containing protein. (128 aa)
LOC102787073E3 ubiquitin-protein ligase RNF8; E3 ubiquitin-protein ligase that plays a key role in DNA damage signaling via 2 distinct roles: by mediating the 'Lys-63'-linked ubiquitination of histones H2A and H2AX and promoting the recruitment of DNA repair proteins at double-strand breaks (DSBs) sites, and by catalyzing 'Lys-48'-linked ubiquitination to remove target proteins from DNA damage sites. Following DNA DSBs, it is recruited to the sites of damage by ATM-phosphorylated MDC1 and catalyzes the 'Lys-63'-linked ubiquitination of histones H2A and H2AX, thereby promoting the formation of TP53 [...] (540 aa)
Your Current Organism:
Neolamprologus brichardi
NCBI taxonomy Id: 32507
Other names: Lamprologus brichardi, N. brichardi, lyretail cichlid
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