20 items (Neolamprologus brichardi) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC102796939	Nitric oxide synthase 1 (neuronal) adaptor protein b. (443 aa)
	LOC102781386	Heterogeneous nuclear ribonucleoprotein K, like. (411 aa)
	LOC102777403	Fermitin family member 3b. (625 aa)
	ENSNBRP00000027163	HP domain-containing protein. (83 aa)
	LOC102789815	PID domain-containing protein. (619 aa)
	LOC102787111	Scinderin. (660 aa)
	LOC102785537	Actin filament associated protein 1-like 1a. (704 aa)
	SVIL	Supervillin. (1664 aa)
	SH3PXD2A	SH3 and PX domains 2A. (1088 aa)
	ENSNBRP00000021405	SH3 and PX domains 2Aa. (1004 aa)
	LOC102782635	Scinderin like a. (712 aa)
	LOC102794795	Vinculin b. (1066 aa)
	ENSNBRP00000017274	HP domain-containing protein. (1541 aa)
	LOC102779616	Supervillin d. (1348 aa)
	ENSNBRP00000015754	Heterogeneous nuclear ribonucleoprotein K. (358 aa)
	LOC102797472	Vinculin a. (1126 aa)
	ENSNBRP00000010442	Si:dkey-34e4.1. (299 aa)
	LOC102785173	SH3 and PX domains 2B. (868 aa)
	LOC102792846	Scinderin like b. (689 aa)
	LOC102795625	Actin filament associated protein 1 like 1. (636 aa)

Your Current Organism:

Neolamprologus brichardi

NCBI taxonomy Id: 32507
Other names: Lamprologus brichardi, N. brichardi, lyretail cichlid

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSNBRP00000010442	LOC102789815	ENSNBRP00000010442	ENSNBRP00000028920	Si:dkey-34e4.1.	PID domain-containing protein.	0.859
ENSNBRP00000010442	LOC102796939	ENSNBRP00000010442	ENSNBRP00000006954	Si:dkey-34e4.1.	Nitric oxide synthase 1 (neuronal) adaptor protein b.	0.867
ENSNBRP00000015754	LOC102781386	ENSNBRP00000015754	ENSNBRP00000007195	Heterogeneous nuclear ribonucleoprotein K.	Heterogeneous nuclear ribonucleoprotein K, like.	0.842
LOC102777403	LOC102794795	ENSNBRP00000001945	ENSNBRP00000020556	Fermitin family member 3b.	Vinculin b.	0.419
LOC102777403	LOC102797472	ENSNBRP00000001945	ENSNBRP00000014986	Fermitin family member 3b.	Vinculin a.	0.419
LOC102781386	ENSNBRP00000015754	ENSNBRP00000007195	ENSNBRP00000015754	Heterogeneous nuclear ribonucleoprotein K, like.	Heterogeneous nuclear ribonucleoprotein K.	0.842
LOC102782635	LOC102787111	ENSNBRP00000020639	ENSNBRP00000024347	Scinderin like a.	Scinderin.	0.686
LOC102787111	LOC102782635	ENSNBRP00000024347	ENSNBRP00000020639	Scinderin.	Scinderin like a.	0.686
LOC102787111	LOC102792846	ENSNBRP00000024347	ENSNBRP00000002988	Scinderin.	Scinderin like b.	0.817
LOC102789815	ENSNBRP00000010442	ENSNBRP00000028920	ENSNBRP00000010442	PID domain-containing protein.	Si:dkey-34e4.1.	0.859
LOC102789815	LOC102796939	ENSNBRP00000028920	ENSNBRP00000006954	PID domain-containing protein.	Nitric oxide synthase 1 (neuronal) adaptor protein b.	0.863
LOC102792846	LOC102787111	ENSNBRP00000002988	ENSNBRP00000024347	Scinderin like b.	Scinderin.	0.817
LOC102794795	LOC102777403	ENSNBRP00000020556	ENSNBRP00000001945	Vinculin b.	Fermitin family member 3b.	0.419
LOC102794795	LOC102797472	ENSNBRP00000020556	ENSNBRP00000014986	Vinculin b.	Vinculin a.	0.814
LOC102796939	ENSNBRP00000010442	ENSNBRP00000006954	ENSNBRP00000010442	Nitric oxide synthase 1 (neuronal) adaptor protein b.	Si:dkey-34e4.1.	0.867
LOC102796939	LOC102789815	ENSNBRP00000006954	ENSNBRP00000028920	Nitric oxide synthase 1 (neuronal) adaptor protein b.	PID domain-containing protein.	0.863
LOC102797472	LOC102777403	ENSNBRP00000014986	ENSNBRP00000001945	Vinculin a.	Fermitin family member 3b.	0.419
LOC102797472	LOC102794795	ENSNBRP00000014986	ENSNBRP00000020556	Vinculin a.	Vinculin b.	0.814