27 items (Neolamprologus brichardi) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC102793844	Small nuclear RNA activating complex, polypeptide 5. (119 aa)
	LOC102794529	General transcription factor IIIC, polypeptide 5. (469 aa)
	ENSNBRP00000017935	Polymerase (RNA) II (DNA directed) polypeptide L. (67 aa)
	ENSNBRP00000018850	Uncharacterized protein. (312 aa)
	LOC102785137	RPOL9 domain-containing protein. (93 aa)
	ENSNBRP00000013311	Uncharacterized protein. (455 aa)
	ENSNBRP00000019695	General transcription factor IIIC, polypeptide 3. (767 aa)
	LOC102783590	Interactor of little elongator complex ELL subunit 2. (830 aa)
	LOC102787536	RNA polymerase I and III subunit C. (351 aa)
	LOC102786318	Polymerase (RNA) III (DNA directed) polypeptide D. (391 aa)
	LOC102789419	Si:dkey-208k4.2. (371 aa)
	LOC102798306	DNA-directed RNA polymerase III subunit RPC6; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Specific peripheric component of RNA polymerase III which synthesizes small RNAs, such as 5S rRNA and tRNAs; Belongs to the eukaryotic RPC34/RPC39 RNA polymerase subunit family. (316 aa)
	LOC102785588	TFIIIC_sub6 domain-containing protein. (150 aa)
	LOC102784784	Small nuclear RNA activating complex, polypeptide 1b. (352 aa)
	LOC102786294	Zgc:171971. (343 aa)
	LOC102796038	BRF1 RNA polymerase III transcription initiation factor subunit. (610 aa)
	LOC102797428	General transcription factor IIIAa. (360 aa)
	LOC102793669	General transcription factor IIIC, polypeptide 4. (770 aa)
	ENSNBRP00000011303	Uncharacterized protein. (206 aa)
	ENSNBRP00000009185	B-block_TFIIIC domain-containing protein. (758 aa)
	LOC102799546	TATA box binding protein. (251 aa)
	LOC102782360	Polymerase (RNA) III (DNA directed) polypeptide H. (228 aa)
	LOC102782502	Calcitonin gene-related peptide-receptor component protein. (202 aa)
	LOC102778616	BRF1 RNA polymerase III transcription initiation factor subunit b. (622 aa)
	ENSNBRP00000002642	Uncharacterized protein. (155 aa)
	ENSNBRP00000000331	Uncharacterized protein. (94 aa)
	ENSNBRP00000015917	Uncharacterized protein. (130 aa)

Your Current Organism:

Neolamprologus brichardi

NCBI taxonomy Id: 32507
Other names: Lamprologus brichardi, N. brichardi, lyretail cichlid

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSNBRP00000000331	ENSNBRP00000002642	ENSNBRP00000000331	ENSNBRP00000002642	Uncharacterized protein.	Uncharacterized protein.	0.847
ENSNBRP00000000331	ENSNBRP00000009185	ENSNBRP00000000331	ENSNBRP00000009185	Uncharacterized protein.	B-block_TFIIIC domain-containing protein.	0.674
ENSNBRP00000000331	ENSNBRP00000013311	ENSNBRP00000000331	ENSNBRP00000013311	Uncharacterized protein.	Uncharacterized protein.	0.931
ENSNBRP00000000331	ENSNBRP00000017935	ENSNBRP00000000331	ENSNBRP00000017935	Uncharacterized protein.	Polymerase (RNA) II (DNA directed) polypeptide L.	0.985
ENSNBRP00000000331	ENSNBRP00000018850	ENSNBRP00000000331	ENSNBRP00000018850	Uncharacterized protein.	Uncharacterized protein.	0.579
ENSNBRP00000000331	ENSNBRP00000019695	ENSNBRP00000000331	ENSNBRP00000019695	Uncharacterized protein.	General transcription factor IIIC, polypeptide 3.	0.807
ENSNBRP00000000331	LOC102778616	ENSNBRP00000000331	ENSNBRP00000003412	Uncharacterized protein.	BRF1 RNA polymerase III transcription initiation factor subunit b.	0.892
ENSNBRP00000000331	LOC102782360	ENSNBRP00000000331	ENSNBRP00000004130	Uncharacterized protein.	Polymerase (RNA) III (DNA directed) polypeptide H.	0.990
ENSNBRP00000000331	LOC102782502	ENSNBRP00000000331	ENSNBRP00000003882	Uncharacterized protein.	Calcitonin gene-related peptide-receptor component protein.	0.989
ENSNBRP00000000331	LOC102784784	ENSNBRP00000000331	ENSNBRP00000030063	Uncharacterized protein.	Small nuclear RNA activating complex, polypeptide 1b.	0.579
ENSNBRP00000000331	LOC102785137	ENSNBRP00000000331	ENSNBRP00000019412	Uncharacterized protein.	RPOL9 domain-containing protein.	0.993
ENSNBRP00000000331	LOC102786294	ENSNBRP00000000331	ENSNBRP00000030172	Uncharacterized protein.	Zgc:171971.	0.978
ENSNBRP00000000331	LOC102786318	ENSNBRP00000000331	ENSNBRP00000025161	Uncharacterized protein.	Polymerase (RNA) III (DNA directed) polypeptide D.	0.981
ENSNBRP00000000331	LOC102787536	ENSNBRP00000000331	ENSNBRP00000024518	Uncharacterized protein.	RNA polymerase I and III subunit C.	0.991
ENSNBRP00000000331	LOC102793669	ENSNBRP00000000331	ENSNBRP00000015803	Uncharacterized protein.	General transcription factor IIIC, polypeptide 4.	0.706
ENSNBRP00000000331	LOC102793844	ENSNBRP00000000331	ENSNBRP00000020559	Uncharacterized protein.	Small nuclear RNA activating complex, polypeptide 5.	0.644
ENSNBRP00000000331	LOC102794529	ENSNBRP00000000331	ENSNBRP00000016131	Uncharacterized protein.	General transcription factor IIIC, polypeptide 5.	0.816
ENSNBRP00000000331	LOC102796038	ENSNBRP00000000331	ENSNBRP00000031132	Uncharacterized protein.	BRF1 RNA polymerase III transcription initiation factor subunit.	0.892
ENSNBRP00000000331	LOC102798306	ENSNBRP00000000331	ENSNBRP00000027249	Uncharacterized protein.	DNA-directed RNA polymerase III subunit RPC6; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Specific peripheric component of RNA polymerase III which synthesizes small RNAs, such as 5S rRNA and tRNAs; Belongs to the eukaryotic RPC34/RPC39 RNA polymerase subunit family.	0.995
ENSNBRP00000000331	LOC102799546	ENSNBRP00000000331	ENSNBRP00000005240	Uncharacterized protein.	TATA box binding protein.	0.847