18 items (Neolamprologus brichardi) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC102779381	Sodium channel, voltage-gated, type IV, beta a. (233 aa)
	LOC102792756	Gap junction protein; One gap junction consists of a cluster of closely packed pairs of transmembrane channels, the connexons, through which materials of low MW diffuse from one cell to a neighboring cell. (383 aa)
	LOC102789496	Junction plakoglobin a. (728 aa)
	LOC102794020	Uncharacterized protein. (1039 aa)
	LOC102784138	Sodium channel, voltage-gated, type I, beta a. (209 aa)
	ENSNBRP00000024004	CXADR Ig-like cell adhesion molecule. (298 aa)
	LOC102787958	Nebulin-related anchoring protein. (1562 aa)
	LOC102794990	Cadherin 2, type 1, N-cadherin (neuronal); Cadherins are calcium-dependent cell adhesion proteins. (940 aa)
	LOC102788166	Ig-like domain-containing protein. (221 aa)
	LOC102794795	Vinculin b. (1066 aa)
	GJA1	Gap junction protein; One gap junction consists of a cluster of closely packed pairs of transmembrane channels, the connexons, through which materials of low MW diffuse from one cell to a neighboring cell. (388 aa)
	CDH2	Cadherin 2; Cadherins are calcium-dependent cell adhesion proteins. (906 aa)
	LOC102797472	Vinculin a. (1126 aa)
	LOC102797079	Fermitin family member 2. (655 aa)
	LOC102797026	Uncharacterized protein. (691 aa)
	LOC102783231	Catenin (cadherin-associated protein), beta 1. (783 aa)
	ENSNBRP00000011564	CNX domain-containing protein. (271 aa)
	LOC102776349	Gap junction protein; One gap junction consists of a cluster of closely packed pairs of transmembrane channels, the connexons, through which materials of low MW diffuse from one cell to a neighboring cell. (406 aa)

Your Current Organism:

Neolamprologus brichardi

NCBI taxonomy Id: 32507
Other names: Lamprologus brichardi, N. brichardi, lyretail cichlid

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CDH2	ENSNBRP00000011564	ENSNBRP00000017716	ENSNBRP00000011564	Cadherin 2; Cadherins are calcium-dependent cell adhesion proteins.	CNX domain-containing protein.	0.605
CDH2	GJA1	ENSNBRP00000017716	ENSNBRP00000018297	Cadherin 2; Cadherins are calcium-dependent cell adhesion proteins.	Gap junction protein; One gap junction consists of a cluster of closely packed pairs of transmembrane channels, the connexons, through which materials of low MW diffuse from one cell to a neighboring cell.	0.444
CDH2	LOC102783231	ENSNBRP00000017716	ENSNBRP00000013112	Cadherin 2; Cadherins are calcium-dependent cell adhesion proteins.	Catenin (cadherin-associated protein), beta 1.	0.894
CDH2	LOC102789496	ENSNBRP00000017716	ENSNBRP00000030323	Cadherin 2; Cadherins are calcium-dependent cell adhesion proteins.	Junction plakoglobin a.	0.739
CDH2	LOC102794795	ENSNBRP00000017716	ENSNBRP00000020556	Cadherin 2; Cadherins are calcium-dependent cell adhesion proteins.	Vinculin b.	0.550
CDH2	LOC102794990	ENSNBRP00000017716	ENSNBRP00000021530	Cadherin 2; Cadherins are calcium-dependent cell adhesion proteins.	Cadherin 2, type 1, N-cadherin (neuronal); Cadherins are calcium-dependent cell adhesion proteins.	0.841
CDH2	LOC102797026	ENSNBRP00000017716	ENSNBRP00000014280	Cadherin 2; Cadherins are calcium-dependent cell adhesion proteins.	Uncharacterized protein.	0.739
CDH2	LOC102797472	ENSNBRP00000017716	ENSNBRP00000014986	Cadherin 2; Cadherins are calcium-dependent cell adhesion proteins.	Vinculin a.	0.550
ENSNBRP00000011564	CDH2	ENSNBRP00000011564	ENSNBRP00000017716	CNX domain-containing protein.	Cadherin 2; Cadherins are calcium-dependent cell adhesion proteins.	0.605
ENSNBRP00000011564	LOC102776349	ENSNBRP00000011564	ENSNBRP00000011382	CNX domain-containing protein.	Gap junction protein; One gap junction consists of a cluster of closely packed pairs of transmembrane channels, the connexons, through which materials of low MW diffuse from one cell to a neighboring cell.	0.729
ENSNBRP00000011564	LOC102783231	ENSNBRP00000011564	ENSNBRP00000013112	CNX domain-containing protein.	Catenin (cadherin-associated protein), beta 1.	0.642
ENSNBRP00000011564	LOC102789496	ENSNBRP00000011564	ENSNBRP00000030323	CNX domain-containing protein.	Junction plakoglobin a.	0.515
ENSNBRP00000011564	LOC102792756	ENSNBRP00000011564	ENSNBRP00000009630	CNX domain-containing protein.	Gap junction protein; One gap junction consists of a cluster of closely packed pairs of transmembrane channels, the connexons, through which materials of low MW diffuse from one cell to a neighboring cell.	0.729
ENSNBRP00000011564	LOC102794990	ENSNBRP00000011564	ENSNBRP00000021530	CNX domain-containing protein.	Cadherin 2, type 1, N-cadherin (neuronal); Cadherins are calcium-dependent cell adhesion proteins.	0.578
ENSNBRP00000011564	LOC102797026	ENSNBRP00000011564	ENSNBRP00000014280	CNX domain-containing protein.	Uncharacterized protein.	0.515
GJA1	CDH2	ENSNBRP00000018297	ENSNBRP00000017716	Gap junction protein; One gap junction consists of a cluster of closely packed pairs of transmembrane channels, the connexons, through which materials of low MW diffuse from one cell to a neighboring cell.	Cadherin 2; Cadherins are calcium-dependent cell adhesion proteins.	0.444
GJA1	LOC102776349	ENSNBRP00000018297	ENSNBRP00000011382	Gap junction protein; One gap junction consists of a cluster of closely packed pairs of transmembrane channels, the connexons, through which materials of low MW diffuse from one cell to a neighboring cell.	Gap junction protein; One gap junction consists of a cluster of closely packed pairs of transmembrane channels, the connexons, through which materials of low MW diffuse from one cell to a neighboring cell.	0.712
GJA1	LOC102783231	ENSNBRP00000018297	ENSNBRP00000013112	Gap junction protein; One gap junction consists of a cluster of closely packed pairs of transmembrane channels, the connexons, through which materials of low MW diffuse from one cell to a neighboring cell.	Catenin (cadherin-associated protein), beta 1.	0.642
GJA1	LOC102789496	ENSNBRP00000018297	ENSNBRP00000030323	Gap junction protein; One gap junction consists of a cluster of closely packed pairs of transmembrane channels, the connexons, through which materials of low MW diffuse from one cell to a neighboring cell.	Junction plakoglobin a.	0.515
GJA1	LOC102792756	ENSNBRP00000018297	ENSNBRP00000009630	Gap junction protein; One gap junction consists of a cluster of closely packed pairs of transmembrane channels, the connexons, through which materials of low MW diffuse from one cell to a neighboring cell.	Gap junction protein; One gap junction consists of a cluster of closely packed pairs of transmembrane channels, the connexons, through which materials of low MW diffuse from one cell to a neighboring cell.	0.712